Parental gene:

SEC13, ENSTTRG00000004395

Aliases:None
Description:SEC13 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10697]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_2113:1761..54441(-)


>ENSTTRG00000004395
GTGAGAGAACCTATACTTACTCATGTACATTTTGAACTGCTTTGCAGCCATCCTCTTTTAGTATCCACCTTTCTGAAAAG
TCAGGTCAGACTCTATACCTGCAGGGCTTGTGCTGGAAAAGATGACATGGGGGAAATGGTGTCAGTAATTAACACTGTGG
ATACTTCCCATGAGGACATGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATGAGGGTCCTGTGTGGCA
AGTGGCCTGGGCCCACCCCATGTATGGCAATGTCCTGGCATCCTGCTCCTATGACCGCAAAGTCATTATCTGGAAAGAGG
AAAATGGCACCTGGGAGAAGACGCATGAGCACACGGGACACGACTCCTCAGTAAACTCTGTGTGCTGGGCCCCCCATGAC
TACGGCCTGATCCTAGCTTGTGGGAGCTCAGATGGAGCCATCTCTCTGCTGACTTACACCGGGTTGGGCCAATGGGAAGT
GAAGAAGATCAACAATGCTCACACTATTGGCTGCAATGCCGTCAGCTGGGCCCCTGCTGTCGTACCTGGAAGCCTCATAG
ACCAGCCATCTGGGCAGAAGCCCAACTACATCAAGAAGTTTGCATCAGGCGGCTGTGACAACCTCATCAAACTGTGGAAG
GAGGAAGAGGACGGCCAGTGGAAGGAAGAGCAGAAGTTGGAAGCACACAGTGACTGGGTTCGAGATGTGGCCTGGGCCCC
CTCCATCGGCCTGCCCACGAGCACCATCGCCAGCTGCTCCCAGGATGGTCGAGTGTTCATTTGGACCTGTGATGATGCCT
CGGGCAATGCGTGGTCCCCCAAACTGCTGCACAAGTTCAATGATGTTGTATGGCATGTGAGCTGGTCCATCACAGCCAAC
ATCCTAGCTGTCTCAGGCGGAGATAATAAGGTGACCCTGTGGAAGGAGTCGGTTGACGGGCAGTGGGTGTGCATCAGTGA
TGTCAACAAGGGCCAGGGTTCTGTGTCCACTTCAGTCACAGAGGGTCAGCAGAACGAGCAGTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005118 ortholog_one2one 1 retrogene
retro_cfam_278,
Callithrix jacchus ENSCJAG00000016439 ortholog_one2one 2 retrogenes
retro_cjac_1574, retro_cjac_908,
Felis catus ENSFCAG00000011245 ortholog_one2one 1 retrogene
retro_fcat_541,
Homo sapiens ENSG00000157020 ortholog_one2one 1 retrogene
retro_hsap_2630,
Microcebus murinus ENSMICG00000002401 ortholog_one2one 1 retrogene
retro_mmur_1509,
Mus musculus ENSMUSG00000030298 ortholog_one2one 2 retrogenes
retro_mmus_2159, retro_mmus_3443,
Nomascus leucogenys ENSNLEG00000004482 ortholog_one2one 1 retrogene
retro_nleu_642,
Otolemur garnettii ENSOGAG00000017050 ortholog_one2one 1 retrogene
retro_ogar_1655,
Pongo abelii ENSPPYG00000013658 ortholog_one2one 1 retrogene
retro_pabe_2333,
Pan troglodytes ENSPTRG00000014619 ortholog_one2one 1 retrogene
retro_ptro_1774,
Rattus norvegicus ENSRNOG00000010628 ortholog_one2many 2 retrogenes
retro_rnor_1375, retro_rnor_1454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_917 84.00 54.50
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Download FASTA sequences of all ENSTTRG00000004395 retrocopies