Parental gene: | Akr1d1, ENSRNOG00000013004 |
| Aliases: | None |
| Description: | 3-oxo-5-beta-steroid 4-dehydrogenase [Source:RefSeq peptide;Acc:NP_620239] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 4:64933164..64964862(+) |
>ENSRNOG00000013004
ATGAACCTCAGCACTGCAAACCACCACATACCCCTAAATGATGGTAACAGCATTCCGATCATCGGGCTTGGAACCTACTC
AGACCCTAGACCGGTACCCGGCAAGACCTTTATAGCAGTGAAGACAGCTATTGACGAGGGGTACCGGCATATTGATGGGG
CCTACGTCTACCGAAATGAACATGAAGTTGGTGAGGCCATCAGAGAAAAGGTGGCAGAAGGGAAGGTAAAGAGGGAAGAG
ATTTTCTACTGTGGAAAGTTATGGAGTACAGACCATGATCCAGAGATGGTCCGCCCAGCCCTGGAAAGGACCCTGCAGAC
CCTCAAGCTAGATTACATAGACCTTTATATCATTGAGATGCCCATGGCCTTTAAGCCTGGAGAGGAATTTTATCCTAAAG
ATGAGAATGGCCGAGTGATATACCACAAATCAAATCTGTGTGCCACGTGGGAGGCACTGGAAGCTTGCAAAGACGCTGGC
TTGGTGAAATCCCTTGGGGTGTCTAATTTTAACCGCAGGCAGCTGGAGGTCATCTTGAACAAGCCAGGACTCAAGTACAA
GCCTGTCACCAACCAGGTGGAGTGCCACCCGTATTTCACCCAGACAAAACTCTTGAAGTCTGCCAGCAGCATGACATCGA
TTGTCGCATACAGCCCCTTAGGGACCTGTCGCAACCCGTTATGGGTGAATGTATCTTCTCCACCCTTGTTAAAGGATGAA
CTCCTAACCTCGCTGGGGAAAAAGTACAATAAGACACAAGCTCAAATTGTGTTGCGTTTCGACATCCAGCGAGGGTTGGT
TGTCATCCCTAAAAGTACTACCCCTGAAAGGATCAAAGAAAACTTTCAGATCTTTGACTTCTCTCTCACCAAAGAAGAAA
TGAAGGACATTGAAGCCTTGAATAAAAACGTGCGCTTTGTGGAGATGCTCATGTGGAGTGATCATCCTGAATACCCATTT
CATGACGAATACTGA
ATGAACCTCAGCACTGCAAACCACCACATACCCCTAAATGATGGTAACAGCATTCCGATCATCGGGCTTGGAACCTACTC
AGACCCTAGACCGGTACCCGGCAAGACCTTTATAGCAGTGAAGACAGCTATTGACGAGGGGTACCGGCATATTGATGGGG
CCTACGTCTACCGAAATGAACATGAAGTTGGTGAGGCCATCAGAGAAAAGGTGGCAGAAGGGAAGGTAAAGAGGGAAGAG
ATTTTCTACTGTGGAAAGTTATGGAGTACAGACCATGATCCAGAGATGGTCCGCCCAGCCCTGGAAAGGACCCTGCAGAC
CCTCAAGCTAGATTACATAGACCTTTATATCATTGAGATGCCCATGGCCTTTAAGCCTGGAGAGGAATTTTATCCTAAAG
ATGAGAATGGCCGAGTGATATACCACAAATCAAATCTGTGTGCCACGTGGGAGGCACTGGAAGCTTGCAAAGACGCTGGC
TTGGTGAAATCCCTTGGGGTGTCTAATTTTAACCGCAGGCAGCTGGAGGTCATCTTGAACAAGCCAGGACTCAAGTACAA
GCCTGTCACCAACCAGGTGGAGTGCCACCCGTATTTCACCCAGACAAAACTCTTGAAGTCTGCCAGCAGCATGACATCGA
TTGTCGCATACAGCCCCTTAGGGACCTGTCGCAACCCGTTATGGGTGAATGTATCTTCTCCACCCTTGTTAAAGGATGAA
CTCCTAACCTCGCTGGGGAAAAAGTACAATAAGACACAAGCTCAAATTGTGTTGCGTTTCGACATCCAGCGAGGGTTGGT
TGTCATCCCTAAAAGTACTACCCCTGAAAGGATCAAAGAAAACTTTCAGATCTTTGACTTCTCTCTCACCAAAGAAGAAA
TGAAGGACATTGAAGCCTTGAATAAAAACGTGCGCTTTGTGGAGATGCTCATGTGGAGTGATCATCCTGAATACCCATTT
CATGACGAATACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 719 .17 RPM |
| SRP017611_kidney | 0 .35 RPM |
| SRP017611_brain | 0 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012872 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000122787 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014684 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013710 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018037 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019740 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009513 | other_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009734 | other_paralog | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000017165 | other_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000038361 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2559 | 51.79 | 50.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000013004 retrocopies