Parental gene: | RGD1564865, ENSRNOG00000038361 |
| Aliases: | RGD1564865, RGD1309566 |
| Description: | 20-alpha-hydroxysteroid dehydrogenase-like [Source:RefSeq peptide;Acc:NP_001157868] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 17:71182339..71211047(+) |
>ENSRNOG00000038361
ATTCCTGCAAGTAAGATTTTGGAGTCTACAAAAATAGCAATAGATATTGGGTTCCGCCATATTGATTCTGCTTATGTATA
TAAAAATGAAAAGGAAGTAGGAGAGGCTATTCGAAGCAAGATTACAGGTGGTGTTGTGAAAAGAGAAGACATATTTCTCA
CTACAAAGCTTTGGAGTACATTCCATCGACCAGAACTGGTCCGAGTTGGCTTAGAAAGATCACTCAAAAGCTTTCAACTA
GATTATGTTGACCTCTATCTTATTCATTACCCAATATCAATTAAGCCATCAGAGGAGATATATACAAAAGATGAAAATGG
AAAAATATTGTTTGAGACAGTAGATCTCTGTGCCATATGGGAGGCCATGGAAAAGTGTAAGGATGCAGGTTTGGCCAAGT
CCATCGGGGTGTCCAACTTTAACCGCAGGCAGCTAGAGATGATCCTGAACAAGCCGGGGCTCAAGCACAGGCCTGTGTGT
AACCAGGTAGAATGTCACCCTTATCTGAACCAGAGCAAGCTGATGGATTTCTGCAAGTCACAAGACATTGTTCTTGTTGC
CTATGCAGCCCTGGGGTCTCAGCGACCTACAAATTGGGTGGACAAGAATGCCCCATTTCTTTTGAATGACCCAGTTCTTG
GTGGCATGGCCAAAAAACACAATCGAAGTCCAGCTCAGATTGCCCTTCGCTACCAGGTACAGCGTGGGGTTGTTGCCCTG
GCCCAAACTTATGAACAGAAGGAGATGAAAGAGAACATTCAGGTATTTGAATTTCAGTTGCCTTCCGAGGATATGGAAGT
CCTAGATGGCCTGAACAGAAACTTCAGGTATTTTCCTGTGAACATAGCTGCTGAACACCCTAATTATCCATATTCTGATG
ACTATTAG
ATTCCTGCAAGTAAGATTTTGGAGTCTACAAAAATAGCAATAGATATTGGGTTCCGCCATATTGATTCTGCTTATGTATA
TAAAAATGAAAAGGAAGTAGGAGAGGCTATTCGAAGCAAGATTACAGGTGGTGTTGTGAAAAGAGAAGACATATTTCTCA
CTACAAAGCTTTGGAGTACATTCCATCGACCAGAACTGGTCCGAGTTGGCTTAGAAAGATCACTCAAAAGCTTTCAACTA
GATTATGTTGACCTCTATCTTATTCATTACCCAATATCAATTAAGCCATCAGAGGAGATATATACAAAAGATGAAAATGG
AAAAATATTGTTTGAGACAGTAGATCTCTGTGCCATATGGGAGGCCATGGAAAAGTGTAAGGATGCAGGTTTGGCCAAGT
CCATCGGGGTGTCCAACTTTAACCGCAGGCAGCTAGAGATGATCCTGAACAAGCCGGGGCTCAAGCACAGGCCTGTGTGT
AACCAGGTAGAATGTCACCCTTATCTGAACCAGAGCAAGCTGATGGATTTCTGCAAGTCACAAGACATTGTTCTTGTTGC
CTATGCAGCCCTGGGGTCTCAGCGACCTACAAATTGGGTGGACAAGAATGCCCCATTTCTTTTGAATGACCCAGTTCTTG
GTGGCATGGCCAAAAAACACAATCGAAGTCCAGCTCAGATTGCCCTTCGCTACCAGGTACAGCGTGGGGTTGTTGCCCTG
GCCCAAACTTATGAACAGAAGGAGATGAAAGAGAACATTCAGGTATTTGAATTTCAGTTGCCTTCCGAGGATATGGAAGT
CCTAGATGGCCTGAACAGAAACTTCAGGTATTTTCCTGTGAACATAGCTGCTGAACACCCTAATTATCCATATTCTGATG
ACTATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .28 RPM |
| SRP017611_kidney | 116 .05 RPM |
| SRP017611_brain | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000008668 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009155 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009513 | other_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009734 | other_paralog | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013004 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000017165 | other_paralog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000006005 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2046 | 69.52 | 71.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000038361 retrocopies