Parental gene: | Rcn1, ENSRNOG00000013452 |
| Aliases: | Rcn1, Rcn |
| Description: | reticulocalbin-1 precursor [Source:RefSeq peptide;Acc:NP_001102056] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 3:102026256..102040504(-) |
>ENSRNOG00000013452
ATGGCGCGCGGTGGCCGCCTGGGACTCGCCCTGGGGCTGCTGCTGGCACTGGTGCTGGCGCTGCGGGCCAAGCCCACGGT
GCGCAAGGAGCGCGTGGTTCGGCCCGATTCAGAGCTGGGCGAGCGGCCGCCCGAGGACAACCAGAGCTTCCAGTACGATC
ATGAGGCCTTCCTAGGCAAGGAGGATTCCAAGACCTTCGATCAGCTAAGCCCGGACGAGAGCAAGGAGAGGCTGGGGAAA
ATTGTTGATCGAATCGACAGTGATGGAGACGGCCTTGTTACTACTGAGGAGCTGAAAGTTTGGATCAAACGGGTACAGAA
AAGATACATCTACGATAATGTGGCTAAAGTCTGGAAGGATTATGATAGGGACAAAGACGAAAAGATCTCCTGGGAAGAAT
ACAAGCAGGCCACCTATGGCTACTACCTGGGAAACCCTGCTGAATTCCAAGATAGCTCTGATCATCACACCTTTAAAAAG
ATGCTGCCACGGGATGAGAGGAGGTTTAAGGCTTCAGACCTCGATGGCGACCTGACAGCTACTCGGGAGGAGTTCACTGC
CTTTCTGCACCCAGAGGAGTTTGAACATATGAAGGAGATTGTAGTTCTGGAAACCCTGGAGGATATCGACAAGAACGGGG
ATGGTTTTGTGGACCAGGATGAGTACATTGCGGACATGTTTTCTCACGAGGACAATGGCCCTGAGCCAGACTGGGTTTTG
TCTGAACGGGAGCAGTTCAATGATTTCCGAGATCTGAACAAGGACGGGAAGCTGGACAAGGATGAGATTCGCCACTGGAT
CCTCCCTCAGGACTACGACCATGCACAGGCCGAGGCCCGGCATCTGGTGTATGAGTCAGACAAAAACAAGGATGAGATGC
TAACCAAGGAGGAGATTCTAGACAACTGGAACATGTTTGTGGGAAGCCAAGCCACCAATTACGGGGAAGATCTGACCAAA
AATCATGATGAACTTTGA
ATGGCGCGCGGTGGCCGCCTGGGACTCGCCCTGGGGCTGCTGCTGGCACTGGTGCTGGCGCTGCGGGCCAAGCCCACGGT
GCGCAAGGAGCGCGTGGTTCGGCCCGATTCAGAGCTGGGCGAGCGGCCGCCCGAGGACAACCAGAGCTTCCAGTACGATC
ATGAGGCCTTCCTAGGCAAGGAGGATTCCAAGACCTTCGATCAGCTAAGCCCGGACGAGAGCAAGGAGAGGCTGGGGAAA
ATTGTTGATCGAATCGACAGTGATGGAGACGGCCTTGTTACTACTGAGGAGCTGAAAGTTTGGATCAAACGGGTACAGAA
AAGATACATCTACGATAATGTGGCTAAAGTCTGGAAGGATTATGATAGGGACAAAGACGAAAAGATCTCCTGGGAAGAAT
ACAAGCAGGCCACCTATGGCTACTACCTGGGAAACCCTGCTGAATTCCAAGATAGCTCTGATCATCACACCTTTAAAAAG
ATGCTGCCACGGGATGAGAGGAGGTTTAAGGCTTCAGACCTCGATGGCGACCTGACAGCTACTCGGGAGGAGTTCACTGC
CTTTCTGCACCCAGAGGAGTTTGAACATATGAAGGAGATTGTAGTTCTGGAAACCCTGGAGGATATCGACAAGAACGGGG
ATGGTTTTGTGGACCAGGATGAGTACATTGCGGACATGTTTTCTCACGAGGACAATGGCCCTGAGCCAGACTGGGTTTTG
TCTGAACGGGAGCAGTTCAATGATTTCCGAGATCTGAACAAGGACGGGAAGCTGGACAAGGATGAGATTCGCCACTGGAT
CCTCCCTCAGGACTACGACCATGCACAGGCCGAGGCCCGGCATCTGGTGTATGAGTCAGACAAAAACAAGGATGAGATGC
TAACCAAGGAGGAGATTCTAGACAACTGGAACATGTTTGTGGGAAGCCAAGCCACCAATTACGGGGAAGATCTGACCAAA
AATCATGATGAACTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .94 RPM |
| SRP017611_kidney | 28 .40 RPM |
| SRP017611_brain | 46 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000049449 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000003385 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_797 | 78.46 | 98.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1207 | 79.32 | 90.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1224 | 72.79 | 92.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2111 | 79.75 | 97.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2112 | 80.06 | 97.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_2113 | 80.50 | 98.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_rnor_2352 | 84.10 | 59.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_rnor_2353 | 80.50 | 98.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_rnor_2354 | 77.73 | 64.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_rnor_2355 | 79.50 | 98.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_rnor_2408 | 80.15 | 79.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_rnor_2409 | 79.25 | 80.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_rnor_2410 | 79.75 | 97.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_rnor_2434 | 76.96 | 62.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_rnor_2435 | 75.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_rnor_2436 | 75.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_rnor_2437 | 76.96 | 62.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_rnor_2438 | 76.85 | 62.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_rnor_2486 | 78.49 | 80.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_rnor_2508 | 75.13 | 58.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_rnor_2509 | 78.82 | 62.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_rnor_2510 | 76.96 | 62.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_rnor_2511 | 76.85 | 62.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_rnor_2513 | 75.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_rnor_2664 | 72.67 | 52.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_rnor_2711 | 78.49 | 80.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_rnor_2716 | 76.00 | 61.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_rnor_2760 | 81.31 | 88.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000013452 retrocopies