Parental gene:

Ccdc137, ENSRNOG00000048712

Aliases:None
Description:coiled-coil domain containing 137 [Source:MGI Symbol;Acc:MGI:1914541]
Organism:Rat (Rattus norvegicus)
Coordinates:10:109223662..109230044(+)


>ENSRNOG00000048712
ATGGTGAAGCCTGGGCGTGTAGCGCGGCCTACTGCGCGGTCTGCCGGTCTTGGAGGCTCGGGACAACCGCAGGCGCGACA
GCAGCAGCAGTCGCAGGGACAGCAGCGCTTGGCCTCACGGCCGGGACAGCGCAGCAAAGAAAAGAAGAAAGTGAATTGCA
AGCCTAAAAACCAGGATGAGCAAGAAATCCCTTTCCGGCTCCGAGAGATTATGAGGAGCCGACAGGAGATGAAAAAGACA
CTAAGTAACAAGAAGAGAAAAAAGGAAGCCCAGGTGGCTTTCAAGAAGACATTGGAAAAGGAAGCGAAAGGAGAGGAGCC
AGACATCACTGTCCCCAAGTTCAAGCAGAGGAAGGGGGAGTCTGATGTGGCCTACATCCAGCGCATGGAGCAGGAGGCCC
AGCACGTGCTGTTTCTTAGCAAGAACCAGGCCACTCGACAGCCAGAGGTGCAGGCAGCTCCCAAGAAGGAGAAGTCTGAG
CGGAAGAAAGCGTTCCAGAAGCGACGACTTGAAAAGGCCCAGAAGAAGAAGGAAGCACGAGCAGTGGACAGATTGGAGCA
AGAGTTGCTAAAAGATACCGTAAAGTTTGGAGAAGTTGTGCTGCAGCCCCCGGAGCTGACAGTTCAGCCTAGAAGGAGCA
CAAGCAGAGATGCGCCTGGGAAGAAATCACTAATGCTGAAGATGCTTTTGGGCCCTGGTGGTGTGTCCCCGGCTCCAGCC
ACCTCACTGGCCCGCCAGCGGATCCTGGGGGAAGAGCGGGAACGAGCTGTTCAGGCTTACAGAGCCCTGAAGAAGCTGCA
TCGACAGGAAGTGACACCTGCACAGCCACCAGGCAGCTCTTCCCAGAGGCAGCCTCAGGCTTGTCTATGA

Library Parental gene expression (RPM)
SRP017611_liver 6 .25 RPM
SRP017611_kidney 10 .33 RPM
SRP017611_brain 12 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000014878 ortholog_one2one 1 retrogene
retro_eeur_523,
Homo sapiens ENSG00000185298 ortholog_one2one 1 retrogene
retro_hsap_2661,
Gorilla gorilla ENSGGOG00000009333 ortholog_one2one 1 retrogene
retro_ggor_1857,
Macaca mulatta ENSMMUG00000008831 ortholog_one2one 1 retrogene
retro_mmul_1511,
Monodelphis domestica ENSMODG00000002713 ortholog_one2one 1 retrogene
retro_mdom_1355,
Mus musculus ENSMUSG00000049957 ortholog_one2one 1 retrogene
retro_mmus_641,
Nomascus leucogenys ENSNLEG00000013830 ortholog_one2one 3 retrogenes
retro_nleu_1264, retro_nleu_1530, retro_nleu_586,
Pongo abelii ENSPPYG00000008741 ortholog_one2one 1 retrogene
retro_pabe_2312,
Pan troglodytes ENSPTRG00000009767 ortholog_one2one 1 retrogene
retro_ptro_1793,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_472 85.33 51.56
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000048712 retrocopies