Parental gene: | VRK1, ENSSARG00000009110 |
| Aliases: | None |
| Description: | vaccinia related kinase 1 [Source:HGNC Symbol;Acc:12718] |
| Organism: | Shrew (Sorex araneus) |
| Coordinates: | GeneScaffold_1110:1904..34944(+) |
>ENSSARG00000009110
GATACGAATTCTTCAAAATCTGTTGGCAGCGACGCACCCTGTGTTGTCAAAGTGGAACCCAGTGACAACGGACCTCTCTT
CACCGAGTTGAAATTCTACCAGCGAGCTGCCAAGGCGGAGCAGATTCAGAAGTGGATCCGCGCCCGCAAGCTGAGGTACC
TGGGCGTGCCCAAGTACTGGGGCTCCCTGCACGAGAAGAACGGCAGGAGTTACAGGTTTATGATAATGGACCGCTTTGGG
AGTGACCTTCAGAAAATATATGAAGCAAATGCCAAAAGGTTTTCTCGGAAAACGGTCTTGCAGCTGAGCTTAAGAATTCT
GGATATTCTGGAATACATCCACGAGCATGAGTACGTGCACGGCGACATCAAGGCCTCGAACCTCCTTCTGAGCGTCAAGA
ACCCTGACCAGGTGTACTTGGTCGACTACGGCCTGGCCTACCGCTACTGCCCGGAGGGGGTTCACAAGGAGTACAGGGAG
GACCCGAAGCGATGCCACGACGGCACCCTGGAGTTCACCAGCATCGACGCGCACAACGGCGTGGCCCCGTCAAGACGTGG
CGATTTGGAGATACTCGGCTACTGCATGATCCAGTGGCTCAGTGGACACCTTCCTTGGGAGGATAATTTGAAAGACCCCA
ACTATGTTAGAGATTCCAAAATCAGATATAGAGAAATTGCAAGTTTGATGGACAAATGTTTTCCTGAGAAAAACAAGCCA
GGTGAAATTGCTAAATACTTGGAAACAGTGAAATTCCTGGACTATGCTGAAAAACCTCTTTATCAAAATCTACGAGATAT
TCTTTTGCAAGGACTTAAAGCTATAGGAAGTAAGGATGACGGCAAGCTGGACCTCAGTGTTGTGGAGAACGGAGGTTTGA
AAGCCAAAACCATAACAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCAAAAACCAGAAAGAGAGTCCGGAAATAA
GATACGAATTCTTCAAAATCTGTTGGCAGCGACGCACCCTGTGTTGTCAAAGTGGAACCCAGTGACAACGGACCTCTCTT
CACCGAGTTGAAATTCTACCAGCGAGCTGCCAAGGCGGAGCAGATTCAGAAGTGGATCCGCGCCCGCAAGCTGAGGTACC
TGGGCGTGCCCAAGTACTGGGGCTCCCTGCACGAGAAGAACGGCAGGAGTTACAGGTTTATGATAATGGACCGCTTTGGG
AGTGACCTTCAGAAAATATATGAAGCAAATGCCAAAAGGTTTTCTCGGAAAACGGTCTTGCAGCTGAGCTTAAGAATTCT
GGATATTCTGGAATACATCCACGAGCATGAGTACGTGCACGGCGACATCAAGGCCTCGAACCTCCTTCTGAGCGTCAAGA
ACCCTGACCAGGTGTACTTGGTCGACTACGGCCTGGCCTACCGCTACTGCCCGGAGGGGGTTCACAAGGAGTACAGGGAG
GACCCGAAGCGATGCCACGACGGCACCCTGGAGTTCACCAGCATCGACGCGCACAACGGCGTGGCCCCGTCAAGACGTGG
CGATTTGGAGATACTCGGCTACTGCATGATCCAGTGGCTCAGTGGACACCTTCCTTGGGAGGATAATTTGAAAGACCCCA
ACTATGTTAGAGATTCCAAAATCAGATATAGAGAAATTGCAAGTTTGATGGACAAATGTTTTCCTGAGAAAAACAAGCCA
GGTGAAATTGCTAAATACTTGGAAACAGTGAAATTCCTGGACTATGCTGAAAAACCTCTTTATCAAAATCTACGAGATAT
TCTTTTGCAAGGACTTAAAGCTATAGGAAGTAAGGATGACGGCAAGCTGGACCTCAGTGTTGTGGAGAACGGAGGTTTGA
AAGCCAAAACCATAACAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCAAAAACCAGAAAGAGAGTCCGGAAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000001772 | ortholog_one2one | 1 retrogene | |
| Danio rerio | ENSDARG00000018006 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012543 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005475 | other_paralog | 1 retrogene | |
| Sorex araneus | ENSSARG00000011446 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sara_287 | 66.31 | 52.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sara_337 | 71.20 | 52.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSARG00000009110 retrocopies