Parental gene:

KIF2C, ENSSSCG00000003931

Aliases:None
Description:kinesin family member 2C [Source:HGNC Symbol;Acc:6393]
Organism:Pig (Sus scrofa)
Coordinates:6:154001351..154023020(+)


>ENSSSCG00000003931
CTGCTCATGGACTCGTCGCTTCAGGCTCGCCTGTTCCCTGGTCTCTCCATCAAGATCCAGCGTAGTAACGGCTTAATTCA
CAGTGCCAATGTAAGGACTGTAAACTTGGAGAAATCCTGTGTTTCGGTGGAATGGACAGAAGGAGGAGCCACAAAGGGCA
AAGAGATTGATTTTGATGATGTGACTGCAATAAACCCAGAACTCTTGGAGCTCCTCCCCTTACAACCCAAGGACAATCTG
CCCCTGCAGGAGAATGTGACGGGTCAGAAACAAAAACGCAGATCAATCAACTCCAAAATTCCTGCTCCAAAGGAAGGTCT
CCGGGGCCGCTCGACTCGCATGTCCACCATCTCCGAGGCTCGCGTCCCCGCTCAGGAGAATGAAATGGAGGTGGAGCCGC
CTGCGTCCGCACCTTCCCGCAGGCAGTTCTCAGTTCCCGCCGGCCTCCCCAGGTTCTCCTGCCCTGCAGTGACTGAAATA
CCATTGACGATGGCCAGCGCGGAGGGGGAAGAGCAAGTCCACTCCACCCGAGGCAGCTCTTCTGCAAACCCCGTGAACTC
AGTTCGGAGGAAATCATGCATTGTGAAGGAAATGGAAAAAATGAAGAACAAGAGAGAAGAGAAGAGGGCCCAGAACTCTG
AAATGAGGATAAAGCGAGCTCAGGAGTATGACAACAGCTTTCCAAACTGGGAATTTGCCCGGATGATTAAAGAATTCCGG
GCTACGTTGGACTGTCATCCACTCACTGTGACGGATCCTATCGAAGAGCACAGGATATGTGTCTGCGTTCGAAAACGTCC
GCTAAATAAACAAGAATTGGCCAAGAAAGAAATCGACGTGATTTCCGTTCCTAGCAAGTGTGTCCTCCTGGTACATGAGC
CCAAGTTAAAGGTAGACTTGACCAAGTATCTGGAGAACCAGGCGTTCTGCTTTGACTTCGCATTTGATGAAACAGCTTCA
AATGAAGTCGTCTACAGGTTCACAGCAAGGCCCCTGGTACAGACAATCTTTGAAGGGGGAAAAGCAACCTGTTTTGCATA
TGGCCAGACAGGAAGTGGCAAGACTCATACGATGGGGGGAGGCCTCTATGGAAAAGCCCAGAGCGCGTCCAAAGGGATCT
ATGCCATGGCCTCCCAGGACGTCTTCCTCCTGAAGAGTCAGCCCCGCTACCGGAGCCTGGGCCTGGAAGTCTACGTGACG
TTCTTCGAGATCTACAACGGGAAGCTGTTTGACTTGCTCAACAAGAAGGCCAAGCTGCGCGTGCTGGAGGACGGCAAGCA
GCAGGTGCAGGTGGTGGGGCTGCAGGAGCACCTGGTGAGCTGTGCTGACGACGTCATCAAGATGATTGACATAGGCAGCG
CCTGCAGGACCTCTGGGCAGACATTTGCCAACTCCAACTCTTCCCGCTCCCACGCCTGCTTCCAGATTCTTCTTCGAGCC
AAAGGAAGAGTGCACGGCAAGTTCTCTTTGGTGGATCTGGCCGGGAATGAGCGAGGTGCGGACACGTCCAGCGCTGATAG
GCAGACCCGCATGGAGGGTGCAGAAATCAACAAGAGTCTCCTGGCTCTGAAGGAGTGCATCCGGGCCCTGGGACAGAACA
AGGCTCACACTCCTTTCCGCGAGAGCAAGCTGACGCAGGTGCTGAGGGACTCCTTCATCGGGGAGAACTCGAGGACCTGC
ATGATTGCCATGATCTCGCCAGGCATAAGCTCCTGTGAATATACCTTAAATACACTAAGATACGCGGACAGGGTCAAGGA
GCTGAGCCCGCACAGTGGGCCCAGTGGGGAGCAGCCCGTTCAGATGGACACCGAAGACATGGAAGCCAGCTCCAACGGGG
CCCTGAGCACAGGCGACTTCTCCAAGGAAGAGGAGGAGCTCTCTTCCCAGATCTCCAGCTTCAATGAAGCCATGACTCAG
ATCAGGGAGCTGGAGGAGAGGGCCGTGGAAGAGCTCAAGGAGATTATACAGCAAGGGCCAGGCTGGCTGGAGCTCTCCGA
GATGACTGAGCAGCCAGACTACGACCTGGAGACCTTTGTGAACAAAGCAGAGTGTGCCCTGGCCCAGCAAGCCAAGCACT
TCTCAGCCCTGCGAGATGTCATCAAGGCCTTGCGCCTGGCCATGCAGCTGGAAGAGCAGGCCAGCAAACAAATAAGCAGC
AAGAAACGGCCCCAGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 1 .33 RPM
SRP014902_testis 14 .00 RPM
SRP018856_adipose 0 .05 RPM
SRP018288_kidney 2 .56 RPM
SRP018288_lung 10 .39 RPM
SRP018288_liver 0 .64 RPM
SRP018288_heart 1 .73 RPM
SRP035408_liver 12 .51 RPM
SRP035408_brain 2 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Mus musculus ENSMUSG00000028678 ortholog_one2one 1 retrogene
retro_mmus_1251,
Otolemur garnettii ENSOGAG00000006916 ortholog_one2one 1 retrogene
retro_ogar_1892,
Pongo abelii ENSPPYG00000001427 ortholog_one2one 1 retrogene
retro_pabe_88,
Pteropus vampyrus ENSPVAG00000009856 ortholog_one2one 1 retrogene
retro_pvam_3,
Tursiops truncatus ENSTTRG00000000748 ortholog_one2one 1 retrogene
retro_ttru_1318,
Drosophila melanogaster FBgn0030268 ortholog_many2many 2 retrogenes
retro_dmel_1, retro_dmel_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_25 62.01 56.28
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Download FASTA sequences of all ENSSSCG00000003931 retrocopies