Parental gene: | ENSSSCG00000009290 |
| Aliases: | None |
| Description: | None |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 11:2038585..2124705(-) |
>ENSSSCG00000009290
ATGCTGAATCTCCCCCAGCCCTCGAGGGATTCTCCGACGCTGCTCACGCCTGGAATGATGGAAAACCTCTTCCACGAGAT
GGGACACGCCATGCATTCGATGCTGGGCCGGACTCGCTACCAGCACGTCACCGGGACCAGGTGCCCCACGGACTTCGCCG
AGGTCCCGTCCATCCTGATGGAGTACTTCGCCGCCGACTACCGCGTGGTGCAGCAGTTCGCCCGCCACTACCAGACGGGC
CAGTCACTGCCCAGAAGCATGGTGTCCCGACTCTGCGAGTCTAAAAAGGTCTGCGCTGCGGCCGACATGCAGCTCCAGGT
CTTCTACGCGGCTCTGGATCAGCTCTACCACGGCCCGCACCCCCGGGGGCGGTGCACCACGGACGTCCTCAGAGCCACGC
AGGAGAGGTTCTACGGCCTGCCCTACGTCCCCGGCACGGCCTGGCAGCTGCGGTTCAGCCACCTCGTGGGCTACGGTGCC
AAGTACTACTCATACCTGATGTCGCGGGCGGTGGCCTCCATGGTCTGGAGAGAGTGTTTCCTACAGGATCCTTTCAACAG
GGCGGCGGGGGAGCGCTACCGGCGGGAGATGCTGGCGCACGGCGGGGGCAAGGAGCCCCTGCTCATGGTGGAAGGTATGC
TTCAGAAGCGCCCTTCCATCGACGACTTCGTAAACGCCCTCGTGTGCGACTTGGATCTGGACGCGGAGAGCTTCCTCGCG
GACTCGGAGTGA
ATGCTGAATCTCCCCCAGCCCTCGAGGGATTCTCCGACGCTGCTCACGCCTGGAATGATGGAAAACCTCTTCCACGAGAT
GGGACACGCCATGCATTCGATGCTGGGCCGGACTCGCTACCAGCACGTCACCGGGACCAGGTGCCCCACGGACTTCGCCG
AGGTCCCGTCCATCCTGATGGAGTACTTCGCCGCCGACTACCGCGTGGTGCAGCAGTTCGCCCGCCACTACCAGACGGGC
CAGTCACTGCCCAGAAGCATGGTGTCCCGACTCTGCGAGTCTAAAAAGGTCTGCGCTGCGGCCGACATGCAGCTCCAGGT
CTTCTACGCGGCTCTGGATCAGCTCTACCACGGCCCGCACCCCCGGGGGCGGTGCACCACGGACGTCCTCAGAGCCACGC
AGGAGAGGTTCTACGGCCTGCCCTACGTCCCCGGCACGGCCTGGCAGCTGCGGTTCAGCCACCTCGTGGGCTACGGTGCC
AAGTACTACTCATACCTGATGTCGCGGGCGGTGGCCTCCATGGTCTGGAGAGAGTGTTTCCTACAGGATCCTTTCAACAG
GGCGGCGGGGGAGCGCTACCGGCGGGAGATGCTGGCGCACGGCGGGGGCAAGGAGCCCCTGCTCATGGTGGAAGGTATGC
TTCAGAAGCGCCCTTCCATCGACGACTTCGTAAACGCCCTCGTGTGCGACTTGGATCTGGACGCGGAGAGCTTCCTCGCG
GACTCGGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 22 .56 RPM |
| SRP014902_testis | 30 .27 RPM |
| SRP018856_adipose | 13 .69 RPM |
| SRP018288_kidney | 21 .57 RPM |
| SRP018288_lung | 11 .51 RPM |
| SRP018288_liver | 7 .84 RPM |
| SRP018288_heart | 14 .96 RPM |
| SRP035408_liver | 12 .42 RPM |
| SRP035408_brain | 8 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000027001 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009424 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006942 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013401 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005207 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_415 | 55.21 | 77.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000009290 retrocopies