Parental gene:

ENSSSCG00000025544

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:11:2125996..2138957(-)


>ENSSSCG00000025544
ATGGGGACCAACCTGCCCGTCAAGGCTGAGAAGCACCTCTTGCCGGAGCGGGTCTGGCACCACTTCGAGGTGGCTGGGGA
CCACGTCGTGGTCGACGGTCTGCGGGCGGAGGCGCCGGATGACTTGGTGCGAGAAGCCGCTTACAAAATTTTTCTTTATC
CCAATGCTGGTCAATTGAAATGTCTAGAAGAATTGCTCAGCAACAGAGATCTCCTGGCCAAGCTGGTGGGGTACGAGAGC
TTTTCCCACAGGGCTCTCCAGGGGACGATGGCCAGAAGCCCAGAGACGGTCATGCAGTTCCTTGAGAAACTCTCTGACAA
ACTTTCTGAAAGAACCATGAAAGATTTTGAGATGATGCGAGGGATGAAAATGAAACTAAATCCTCAAAATTCTGTAAGTA
ACCACGCTGGGATG

Library Parental gene expression (RPM)
SRP014902_placenta 3 .72 RPM
SRP014902_testis 6 .51 RPM
SRP018856_adipose 5 .65 RPM
SRP018288_kidney 13 .50 RPM
SRP018288_lung 2 .34 RPM
SRP018288_liver 4 .96 RPM
SRP018288_heart 6 .99 RPM
SRP035408_liver 7 .57 RPM
SRP035408_brain 3 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000027001 ortholog_one2many 1 retrogene
retro_hsap_3891,
Gorilla gorilla ENSGGOG00000009424 ortholog_one2many 1 retrogene
retro_ggor_2619,
Macaca mulatta ENSMMUG00000006942 ortholog_one2many 1 retrogene
retro_mmul_1732,
Nomascus leucogenys ENSNLEG00000013401 ortholog_one2many 1 retrogene
retro_nleu_1131,
Pongo abelii ENSPPYG00000005207 ortholog_one2many 1 retrogene
retro_pabe_3172,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_414 56.06 93.48
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Download FASTA sequences of all ENSSSCG00000025544 retrocopies