Parental gene:

CCDC169, ENSSSCG00000026564

Aliases:None
Description:coiled-coil domain containing 169 [Source:HGNC Symbol;Acc:34361]
Organism:Pig (Sus scrofa)
Coordinates:11:12284860..12327375(+)


>ENSSSCG00000026564
ATGGAGGAGGGACGAAGCGACACCTTCGACGGTGTGAGCACCGACCGCCTTAAATTGGAGTTACTAGAAGAAATCCACCT
GAAGGATATTGTCCAACTCTCAGTGCTTGAAATAGAACACAAGGTAGCAGAACTGGAAGCCAAACTCAGTACTGATGATG
AAGGTGGTGAATGGAAAACCCGTTACGAGACACAGCTTGAACTGAATGATCAACTAGAAAAGCAAATTGTTTCCCTCAAA
GAGAAATTGGAGAAAATCTGTGGAACTCCTTCAGACAGATTGTCTTCTATTCAAGTCTATGAACAGATGCCAGTGGAATC
CTTAAATGCAGTACTTAAGCAACTAGAGAAAGAAAAAAGGAGTCTGGAAAGTCAAGTGAAAGATTATGCACTGAGACTGG
AACAAGAATCAAAGGCTTACCATAAGACCAGCAATGAGCGCCGTACATACCTAGCCGAAACGTCTCAGGTCTCTGGCTCA
AACCAAGTTTCTAAAAGGCAACAGATGGATTAA

Library Parental gene expression (RPM)
SRP014902_placenta 0 .00 RPM
SRP014902_testis 0 .28 RPM
SRP018856_adipose 1 .04 RPM
SRP018288_kidney 0 .10 RPM
SRP018288_lung 0 .61 RPM
SRP018288_liver 0 .00 RPM
SRP018288_heart 0 .03 RPM
SRP035408_liver 0 .47 RPM
SRP035408_brain 1 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004615 ortholog_one2one 1 retrogene
retro_amel_120,
Equus caballus ENSECAG00000011446 ortholog_one2many 1 retrogene
retro_ecab_111,
Felis catus ENSFCAG00000008786 ortholog_one2one 1 retrogene
retro_fcat_39,
Oryctolagus cuniculus ENSOCUG00000026427 possible_ortholog 1 retrogene
retro_ocun_406,
Otolemur garnettii ENSOGAG00000010367 ortholog_one2one 2 retrogenes
retro_ogar_1996, retro_ogar_957,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_77 71.18 100.00
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Download FASTA sequences of all ENSSSCG00000026564 retrocopies