Parental gene: | ENSSSCG00000028490 |
| Aliases: | None |
| Description: | None |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 16:86038186..86042842(-) |
>ENSSSCG00000028490
ATGCCACCGCCCTGCCTGGGACCTGCGCGGCGGCACCCCGGCCAGCCTGGGCGTCTCCGTCTCAGTCATCCCTCCCGTCA
GCAGCAGGTCGAGGCCGAGAAGAGGCCGTCGAATGCGCTGGACGAGCCCGTCTCTCACTGGAGGCCGAGGCTGACCCTGA
ACGTGATGGTGGATGACTTCGTCTTCGACGGGGCCGCCCTGCCCGCCGACGTGCACCGCTACATGAAGATGGTCCAGCTG
GGGAAGACGGTGCACTACCTGCCCATCCTGTTCATCGACCAGCTCAGCAACCGCGTGAAGGACCTCATGGTCATCAACCG
CTCCACCGCCGAGCTGCCGCTCACGGTGTCCTACGACAAGATCTCGCTGGGGCGGCTGCGCTTCTGGATCCACATGCAGG
ACGCCGTGTACTCGCTGCAGCAGCTCGGCTTTTCGGAGAAGGACGCTGACGAGGTGAAGGGCATTTTCGTGGACACCAAC
CTGTACTTCCTGGCGCTGACCTTCTTCGTGGCCGCGTTCCACCTGCTTTTTGATTTCCTGGCGTTTAAAAACGACATCAG
TTTTTGGAAGAAAAAGAAGACCATGATTGGCATGTCCACCAAAGCAGTGCTCTGGCGCTGCTTCAGCACCGTGGTCATCT
TCCTGTTCCTGCTGGACGAGCAGACGAGCCTGCTGGTGCTGGTCCCCGCGGGCATCGGGGCCGCCATCGAGGTGAGGCAC
CCCCGGGCGCTGGTCTGA
ATGCCACCGCCCTGCCTGGGACCTGCGCGGCGGCACCCCGGCCAGCCTGGGCGTCTCCGTCTCAGTCATCCCTCCCGTCA
GCAGCAGGTCGAGGCCGAGAAGAGGCCGTCGAATGCGCTGGACGAGCCCGTCTCTCACTGGAGGCCGAGGCTGACCCTGA
ACGTGATGGTGGATGACTTCGTCTTCGACGGGGCCGCCCTGCCCGCCGACGTGCACCGCTACATGAAGATGGTCCAGCTG
GGGAAGACGGTGCACTACCTGCCCATCCTGTTCATCGACCAGCTCAGCAACCGCGTGAAGGACCTCATGGTCATCAACCG
CTCCACCGCCGAGCTGCCGCTCACGGTGTCCTACGACAAGATCTCGCTGGGGCGGCTGCGCTTCTGGATCCACATGCAGG
ACGCCGTGTACTCGCTGCAGCAGCTCGGCTTTTCGGAGAAGGACGCTGACGAGGTGAAGGGCATTTTCGTGGACACCAAC
CTGTACTTCCTGGCGCTGACCTTCTTCGTGGCCGCGTTCCACCTGCTTTTTGATTTCCTGGCGTTTAAAAACGACATCAG
TTTTTGGAAGAAAAAGAAGACCATGATTGGCATGTCCACCAAAGCAGTGCTCTGGCGCTGCTTCAGCACCGTGGTCATCT
TCCTGTTCCTGCTGGACGAGCAGACGAGCCTGCTGGTGCTGGTCCCCGCGGGCATCGGGGCCGCCATCGAGGTGAGGCAC
CCCCGGGCGCTGGTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 85 .48 RPM |
| SRP014902_testis | 34 .65 RPM |
| SRP018856_adipose | 23 .35 RPM |
| SRP018288_kidney | 41 .57 RPM |
| SRP018288_lung | 34 .42 RPM |
| SRP018288_liver | 26 .23 RPM |
| SRP018288_heart | 9 .67 RPM |
| SRP035408_liver | 20 .58 RPM |
| SRP035408_brain | 14 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019472 | ortholog_many2many | 1 retrogene | |
| Equus caballus | ENSECAG00000013231 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_215 | 54.60 | 64.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000028490 retrocopies