Parental gene:

HDAC3, ENSSTOG00000016240

Aliases:None
Description:histone deacetylase 3 [Source:HGNC Symbol;Acc:4854]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393314.1:12530592..12547325(+)


>ENSSTOG00000016240
ATGGCCAAGACTGTGGCCTATTTCTACGACCCTGACGTGGGCAACTTCCACTACGGAGCTGGGCACCCTATGAAGCCCCA
TCGCCTGGCATTGACTCATAGCCTGGTCCTGCACTATGGTCTCTATAAGAAGATGATCGTCTTCAAGCCATACCAGGCCT
CCCAGCATGACATGTGCCGCTTCCACTCTGAGGACTACATTGATTTTCTGCAGAGAGTCAGTCCCACCAACATGCAGGGC
TTCACCAAGAGCCTTAATGCCTTCAATGTGGGCGATGACTGCCCAGTGTTTCCCGGGCTCTTTGAGTTCTGCTCCCGTTA
CACAGGTGCATCCCTCCAAGGAGCAACCCAGCTGAACAACAAGATCTGCGATATTGCCATTAACTGGGCTGGTGGTCTGC
ACCATGCCAAGAAGTTTGAGGCCTCTGGCTTTTGCTATGTCAACGACATTGTAATCGGCATCCTGGAGCTGCTCAAGTAC
CACCCCCGCGTGCTCTATATTGATATTGACATCCACCATGGAGATGGCGTTCAGGAAGCCTTCTACCTCACTGACAGGGT
CATGACGGTGTCTTTCCACAAATACGGAAATTACTTCTTCCCTGGTACAGGTGACATGTATGAAGTTGGAGCAGAGAGTG
GCCGCTACTATTGTCTCAATGTGCCCTTGCGGGATGGCATTGATGATCAGAGTTACAAGCACCTTTTCCAGCCGGTCATC
AACCAGGTGGTGGACTTCTACCAGCCCACCTGCATTGTACTCCAGTGTGGAGCTGACTCTCTGGGCTGTGATCGATTGGG
CTGCTTCAACCTCAGTATCCGAGGGCATGGGGAATGTGTTGAATATGTCAAGAGCTTTAATATCCCGCTACTGGTGTTGG
GTGGTGGAGGCTATACTGTCCGAAATGTTGCCCGCTGCTGGACATATGAGACATCACTGCTGGTAGAAGAGGCCATTAGT
GAGGAGCTTCCCTATAGTGAATACTTCGAGTACTTTGCCCCTGACTTCACACTCCATCCAGACGTCAGCACCCGCATTGA
GAATCAGAACTCACGCCAGTATCTGGACCAGATCCGCCAGACAATCTTTGAAAACCTGAAGATGCTGAACCATGCACCTA
GTGTCCAGATTCATGATGTGCCTGCTGATCTCCTGACATATGACAGGACTGACGAGGCTGACGCAGAGGAGAGGGGTCCT
GAGGAGAACTACAGCAGGCCAGAGGCACCCAATGAATTCTATGATGGAGACCACGATAATGACAAGGAAAGCGACGTGGA
AATTTAA

Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000008662 ortholog_one2one 1 retrogene
retro_mluc_642,
Macaca mulatta ENSMMUG00000012588 ortholog_one2many 1 retrogene
retro_mmul_49,
Procavia capensis ENSPCAG00000010817 ortholog_one2one 1 retrogene
retro_pcap_298,
Ictidomys tridecemlineatus ENSSTOG00000012779 within_species_paralog 1 retrogene
retro_itri_374,
Tupaia belangeri ENSTBEG00000007520 ortholog_one2one 1 retrogene
retro_tbel_1811,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1661 77.99 61.21
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Download FASTA sequences of all ENSSTOG00000016240 retrocopies