Parental gene:

U2AF1, ENSVPAG00000002856

Aliases:None
Description:U2 small nuclear RNA auxiliary factor 1 [Source:HGNC Symbol;Acc:12453]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_2250:386..10168(-)


>ENSVPAG00000002856
GTCAACTGCTCATTTTATTTCAAGATCGGAGCGTGTCGCCATGGAGACAGATGCTCTCGGCTGCACAACAAACCGACCTT
TAGCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCCG
TGAGCGACGTGGAGATGCAGGAGCACTATGATGAGTTCTTTGAGGAGGTTTTCACGGAGATGGAGGAGAAGTACGGGGAG
GTGGAGGAGATGAACGTCTGTGACAACCTTGGAGACCACCTCGTGGGGAATGTGTACGTCAAGTTTCGCCGTGAAGAGGA
TGCGGAAAAGGCCGTGATTGACTTGAACAACCGCTGGTTTAACGGGCAGCCCATCCACGCCGAGCTCTCCCCCGTGACCG
ACTTCAGAGAAGCCTGCTGCCGGCAGTACGAGATGGGAGAGTGCACGCGAGGAGGCTTCTGCAACTTCATGCATCTGAAG
CCCATTTCTCGGGAGCTGCGGCGGGAGTACGGGCGCCGTCGCAAGAAGCATAGGTCAAGGTCCCGGTCCCGGGAGCGTCG
CTCTCGGTCGAGAGACCGTGGTCGAGGCGGCGGCGGCGGCGGCGGCGGCGGGGGACGGGAGCGCGACAGGAGGCGGTCGA
GAGATCGGGAGAGATCGGGGCGGTTCTGA

Species Parental gene accession Homology type Retrogenes number
Microcebus murinus ENSMICG00000013835 ortholog_one2one 1 retrogene
retro_mmur_614,
Otolemur garnettii ENSOGAG00000016504 possible_ortholog 1 retrogene
retro_ogar_241,
Pan troglodytes ENSPTRG00000013952 ortholog_one2one 2 retrogenes
retro_ptro_1000, retro_ptro_549,
Tupaia belangeri ENSTBEG00000000453 ortholog_one2one 2 retrogenes
retro_tbel_2115, retro_tbel_963,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_489 92.44 76.58
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Download FASTA sequences of all ENSVPAG00000002856 retrocopies