Parental gene:

GTF3A, ENSVPAG00000004995

Aliases:None
Description:general transcription factor IIIA [Source:HGNC Symbol;Acc:4662]
Organism:Alpaca (Vicugna pacos)
Coordinates:scaffold_5817:53211..59414(-)


>ENSVPAG00000004995
AGGCCATTTGTTTGCAGCCATGAAGGATGTGGCAAAGCCTTTGTCCGGGACTACCACCTGAGCCGCCACGCCCTGGTTCA
CACCGGAGAGAAGCCCTTTGTTTGTGCAGCGAGCGGCTGTGATCAAAAGTTTAACACAAAATCAAACCTGAAGAAACATT
TTGAACGTAAACATGAAAACCAGCAAAAACAATATGTGTGCAGGTTTGAAGGCTGTGAGAAGGCCTTCAAGAAACACCAG
CAGCTGAAAAGCCACCAGTGCCAGCACACCCGCGAGCCGCTGTTCAGGTGCACCCACGAGGGATGCGGAAAACACTTTTC
TTCCCCCAGCAGTCTGAAGCGGCACGGGAAGGTCCACGAGGGCTACGTATGTCAAAAAGAATGTTCTTTTGTGGCAAAAA
CGTGGACAGAACTTTTGAAACACATGAGAGAAACTCATAAAGAGGAAATAACATGTGATGTATGCCAGAAGACATTTAAA
CGCAGAGATTACCTGAAGCAGCACATGAAAACTCACGCCCCAGAGAGGGACGTCTATCGTTGTCCGCGAGAAGGCTGTGG
CCGCACCTACACCACCGTGTTCAACCTCCAGAGCCACATCCTCTCGTTCCACGAGGAGCGGCGCCCATTTGTGTGCGGAA
ACGCCGGCTGCGGCAAGACCTTCGCCATGAAACAGAGTCTCACCAGGCATGCTGTTGTGCACGACCCTGACAAGAAGAAA
ATGAAGCTCAAAGTGAAACCAGCTCGTGAAAAACGGAGTCTGGCCTCTCGGCTCAGTGGGTACATCCCTCCTAAAAGGAA
ACAGGACCCAGGCGTGTCTTTGCCTAGAAACGGAGAGTCACTGAACAGCACTGAAGGTGGGGTGCCCTCCGCTGTTGCGA
TGCTGAGCCCAGAGACA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019373 ortholog_one2one 1 retrogene
retro_cjac_3066,
Equus caballus ENSECAG00000014803 ortholog_one2one 1 retrogene
retro_ecab_866,
Felis catus ENSFCAG00000006982 ortholog_one2one 1 retrogene
retro_fcat_426,
Gasterosteus aculeatus ENSGACG00000003107 ortholog_one2many 1 retrogene
retro_gacu_6,
Gorilla gorilla ENSGGOG00000008407 ortholog_one2one 1 retrogene
retro_ggor_2622,
Microcebus murinus ENSMICG00000014763 ortholog_one2one 1 retrogene
retro_mmur_368,
Macaca mulatta ENSMMUG00000009029 ortholog_one2one 1 retrogene
retro_mmul_1632,
Nomascus leucogenys ENSNLEG00000000331 ortholog_one2one 2 retrogenes
retro_nleu_1134, retro_nleu_214,
Oreochromis niloticus ENSONIG00000014134 ortholog_one2many 1 retrogene
retro_onil_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_456 57.89 56.19
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Download FASTA sequences of all ENSVPAG00000004995 retrocopies