Parental gene:

rhoc, ENSXETG00000006898

Aliases:None
Description:ras homolog gene family, member C [Source:Jamboree;Acc:XB-GENE-941426]
Organism:Xenopus (Xenopus tropicalis)
Coordinates:GL172654.1:2512036..2546027(-)


>ENSXETG00000006898
ATGGCAGCAATTCGGAAAAAGCTGGTGATCGTTGGAGATGGTGCATGTGGGAAGACCTGCTTGCTCATCGTATTCAGCAA
GGATCAATTCCCTGAAGTCTATGTACCAACAGTCTTTGAGAACTACATTGCTGATATAGAAGTAGATGGAAAACAGGTGG
AATTGGCTCTGTGGGACACAGCGGGACAGGAGGATTATGACAGGCTACGCCCCCTTTCTTACCCTGATACCGATGTTATC
TTGATGTGTTTCTCAATTGACAGCCCTGACAGCTTAGAAAATATTCCCGAGAAATGGACACCGGAAGTGAAACATTTTTG
TCCCAACGTACCCATTATTCTTGTTGGTAACAAAAAGGATCTAAGAAATGATGAACACACTAGAAGAGAGCTGACAAAGA
TGAAGCAGGAGCCAGTCAAACCAGAAGATGGCAGAGAAATGGCCAACAGAATCAATGCATTTGGTTACCTGGAGTGTTCT
GCCAAGACAAAGGATGGTGTGAGAGAAGTTTTTGAAATGGCCACACGGGCTGCCTTACAAGTTAGGAAACACAGGAAGAA
GCAACGTTGTTCCATTCTATAA

Library Parental gene expression (RPM)
SRP007412_brain 133 .14 RPM
SRP007412_skeletal_muscle 20 .28 RPM
SRP007412_heart 46 .14 RPM
SRP007412_kidney 46 .14 RPM
SRP007412_liver 69 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014299 ortholog_one2one 1 retrogene
retro_btau_1171,
Canis familiaris ENSCAFG00000013413 ortholog_one2one 1 retrogene
retro_cfam_1152,
Callithrix jacchus ENSCJAG00000013657 ortholog_one2one 2 retrogenes
retro_cjac_1657, retro_cjac_2027,
Equus caballus ENSECAG00000010174 ortholog_one2one 3 retrogenes
retro_ecab_112, retro_ecab_257, retro_ecab_932,
Ficedula albicollis ENSFALG00000000736 ortholog_one2one 1 retrogene
retro_falb_11,
Gorilla gorilla ENSGGOG00000002741 ortholog_one2one 2 retrogenes
retro_ggor_18, retro_ggor_732,
Macropus eugenii ENSMEUG00000004807 possible_ortholog 1 retrogene
retro_meug_37,
Monodelphis domestica ENSMODG00000000981 ortholog_one2one 1 retrogene
retro_mdom_1245,
Otolemur garnettii ENSOGAG00000027678 ortholog_one2one 3 retrogenes
retro_ogar_2606, retro_ogar_3360, retro_ogar_58,
Sarcophilus harrisii ENSSHAG00000001981 ortholog_one2one 1 retrogene
retro_shar_455,
Taeniopygia guttata ENSTGUG00000017533 ortholog_one2one 1 retrogene
retro_tgut_11,
Tetraodon nigroviridis ENSTNIG00000015041 ortholog_one2many 1 retrogene
retro_tnig_2,
Xiphophorus maculatus ENSXMAG00000008103 ortholog_one2one 1 retrogene
retro_xmac_13,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xtro_15 86.32 98.45
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSXETG00000006898 retrocopies