Parental gene: | nfs1, ENSXETG00000007430 |
| Aliases: | None |
| Description: | NFS1 nitrogen fixation 1 homolog [Source:Jamboree;Acc:XB-GENE-1010917] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL172674.1:3617677..3626966(-) |
>ENSXETG00000007430
GAGTCGAATCTCCGCCCTCTATATATGGATGTTCAGGCGACAACCTCATTGGATCCCAGGGTATTGGACCGAATGTTGCC
TTATATGGTAAACTATTATGGAAACCCCCACTCGAGGACCCATGCGTATGGCTGGGAGACTGAGAAAGCTGTGGAGAAAG
CTCGTGAGCAAGTTGCCTCTCTGATCGGAGCAGATTCAAGGGAGATCATTTTTACAAGCGGCGCCATAAATCCAATAATG
TCTCTGCATTACGTGAAGGGTGTTGCCAAATTCTACAAATCACGCAAGAGACACATTCTAACAACCCAGACGGAACACAA
GTGCGTGCTGGATTCTTGCCGCTCCCTGGAGGCCGAGGGATTCCAAGTTACGTACCTGCCTGTGCAGAAGAATGGCCTCG
TGGATTTAAAGGTGTTAGAAGATTCCATCCGGCCGGATACAAGCCTGGTATCTATAATGGCTGTGAATAATGAGATAGGC
GTAAAGCAGCCCATACAAGAGATAGGGCAGATCTGCAGCTCCCGCAAGATCTTCTTCCACACAGATGCAGCTCAGGCCGT
TGGCAAAATTCCCCTTAATGTCAACCAAATGAAGATTGACCTGATGAGTATCAGTGGCCATAAAATCTATGGACCCAAAG
GAGTCGGAGCAATCTATGTCCGACGTAGACCCAGAGTCCGAATGGAGGCCTTAATCAGTGGTGGGGGCCAAGAGCGAGGC
CTGCGCTCTGGGACGGTGCCAGCACCTCTTGTTGTTGGTCTCGGAGCGGCATGCAAAGTGTCTCAGGAAGAGCTAGAGTA
TGATCACAGAAGAATCAGTGCTCTAGCCAAAAGACTCACCCAGAATATAATGAGCCAAATTCCTGAAGTTGTTTTAAACG
GAGATGCAGAGCATCGGTACCCAGGATGCATAAACCTTTCCTTTGCTTATGTGGAAGGGGAAAGCTTACTGATGGCCCTT
AAAGATGTGGCCTTATCATCTGGAAGCGCCTGCACGTCCGCTTCTCTGGAGCCATCTTACGTCTTGCGTGCGATCGGTGC
TGATGAGGACTTGGCGCATTCATCTATAAGATTTGGCATTGGGCGTTTTACTACTGAGGAAGAAGTTGATTACACAGTCA
AAAAGTGTGTTGAAGAAGTAAAACGGCTGCGGGAGATGAGCCCGTTATGGGAGATGGTCCAGGACGGAATTGACTTAAAG
AGCATAAAGTGGACTCAGCACTAA
GAGTCGAATCTCCGCCCTCTATATATGGATGTTCAGGCGACAACCTCATTGGATCCCAGGGTATTGGACCGAATGTTGCC
TTATATGGTAAACTATTATGGAAACCCCCACTCGAGGACCCATGCGTATGGCTGGGAGACTGAGAAAGCTGTGGAGAAAG
CTCGTGAGCAAGTTGCCTCTCTGATCGGAGCAGATTCAAGGGAGATCATTTTTACAAGCGGCGCCATAAATCCAATAATG
TCTCTGCATTACGTGAAGGGTGTTGCCAAATTCTACAAATCACGCAAGAGACACATTCTAACAACCCAGACGGAACACAA
GTGCGTGCTGGATTCTTGCCGCTCCCTGGAGGCCGAGGGATTCCAAGTTACGTACCTGCCTGTGCAGAAGAATGGCCTCG
TGGATTTAAAGGTGTTAGAAGATTCCATCCGGCCGGATACAAGCCTGGTATCTATAATGGCTGTGAATAATGAGATAGGC
GTAAAGCAGCCCATACAAGAGATAGGGCAGATCTGCAGCTCCCGCAAGATCTTCTTCCACACAGATGCAGCTCAGGCCGT
TGGCAAAATTCCCCTTAATGTCAACCAAATGAAGATTGACCTGATGAGTATCAGTGGCCATAAAATCTATGGACCCAAAG
GAGTCGGAGCAATCTATGTCCGACGTAGACCCAGAGTCCGAATGGAGGCCTTAATCAGTGGTGGGGGCCAAGAGCGAGGC
CTGCGCTCTGGGACGGTGCCAGCACCTCTTGTTGTTGGTCTCGGAGCGGCATGCAAAGTGTCTCAGGAAGAGCTAGAGTA
TGATCACAGAAGAATCAGTGCTCTAGCCAAAAGACTCACCCAGAATATAATGAGCCAAATTCCTGAAGTTGTTTTAAACG
GAGATGCAGAGCATCGGTACCCAGGATGCATAAACCTTTCCTTTGCTTATGTGGAAGGGGAAAGCTTACTGATGGCCCTT
AAAGATGTGGCCTTATCATCTGGAAGCGCCTGCACGTCCGCTTCTCTGGAGCCATCTTACGTCTTGCGTGCGATCGGTGC
TGATGAGGACTTGGCGCATTCATCTATAAGATTTGGCATTGGGCGTTTTACTACTGAGGAAGAAGTTGATTACACAGTCA
AAAAGTGTGTTGAAGAAGTAAAACGGCTGCGGGAGATGAGCCCGTTATGGGAGATGGTCCAGGACGGAATTGACTTAAAG
AGCATAAAGTGGACTCAGCACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 17 .72 RPM |
| SRP007412_skeletal_muscle | 19 .05 RPM |
| SRP007412_heart | 20 .76 RPM |
| SRP007412_kidney | 20 .76 RPM |
| SRP007412_liver | 13 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000010393 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017050 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000005561 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_67 | 54.98 | 98.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000007430 retrocopies