Parental gene: | KN538848.1_FG012 |
| Aliases: | None |
| Description: | None |
| Organism: | Longstamen rice (Oryza longistaminata) |
| Coordinates: | KN538848.1:6978..9561(-) |
>KN538848.1_FG012
ATGGCGCTGCGGCTGTCTCCGGCGGCCGTGGCGCTCGCGCTGCTTCTGGCTGCGACCGCCTTGGAGGACGTTGCCAGGGG
CCAGGACACCGAGAGGATCGAAGGGAGTGCGGGTGATGTGCTGGAAGATGACCCTGTCGGGAGGCTTAAGGTGTATGTCT
ACGAGTTGCCCACTAAATACAACAAGAAGATGGTGGCAAAAGATTCCAGATGCCTCAGCCACATGTTTGCTGCAGAGATT
TTCATGCATCGATTCCTCTTGTCAAGTGCGATCCGGACTTTAAATCCGGAGGAAGCTGATTGGTTCTATACTCCAGTATA
CACGACGTGCGATCTTACTCCATGGGGCCATCCCTTGCCCTTCAAGTCTCCAAGGATTATGAGAAGTGCAATTCAGTTCA
TTTCCTCGCATTGGCCCTATTGGAACAGGACAGAGGGGGCAGACCATTTCTTTGTTGTGCCACATGATTTCGGAGCATGC
TTCCATTATCAGGAAGAGAAGGCCATTGAGCGGGGAATCCTGCCATTGCTTCGCCGTGCAACGCTGGTCCAGACTTTTGG
GCAGAAGGATCATGTCTGCCTCAAGGAAGGGTCCATCACCATCCCACCATATGCTCCTCCTCAGAAGATGAAAACTCACC
TTGTTCCCCCAGAGACACCTCGATCCATCTTTGTCTATTTCCGTGGTTTATTCTACGATACCGCAAATGATCCTGAGGGT
GGTTACTATGCAAGAGGTGCCCGTGCATCGGTGTGGGAGAACTTCAAGAACAATCCTCTTTTTGACATCTCCACAGACCA
CCCACCAACCTACTACGAGGACATGCAGCGTTCCATCTTCTGCTTGTGCCCTCTAGGCTGGGCTCCGTGGAGCCCCCGTT
TGGTTGAAGCCGTTGTGTTTGGCTGCATTCCAGTGATCATTGCAGACGACATCGTCCTACCTTTTGCGGACGCGATCCCA
TGGGATGAGATCGGTGTATTTGTGGCGGAGGACGACGTCCCAAAGCTGGACACCATCCTGACATCGATACCGATGGATGT
GATCCTGCGGAAGCAGAGGCTGCTAGCGAACCCGTCGATGAAGCAGGCCATGCTGTTCCCGCAGCCCGCCCAGCCAGGTG
ACGCCTTCCACCAGATACTCAACGGGCTGGGACGGAAGCTTCCACACCCGAAGAGCGTGTACCTGGACCCGGGGCAGAAG
GTGCTGAACTGGACCCAGGGCCCGGTGGGTGACCTGAAGCCATGGTAG
ATGGCGCTGCGGCTGTCTCCGGCGGCCGTGGCGCTCGCGCTGCTTCTGGCTGCGACCGCCTTGGAGGACGTTGCCAGGGG
CCAGGACACCGAGAGGATCGAAGGGAGTGCGGGTGATGTGCTGGAAGATGACCCTGTCGGGAGGCTTAAGGTGTATGTCT
ACGAGTTGCCCACTAAATACAACAAGAAGATGGTGGCAAAAGATTCCAGATGCCTCAGCCACATGTTTGCTGCAGAGATT
TTCATGCATCGATTCCTCTTGTCAAGTGCGATCCGGACTTTAAATCCGGAGGAAGCTGATTGGTTCTATACTCCAGTATA
CACGACGTGCGATCTTACTCCATGGGGCCATCCCTTGCCCTTCAAGTCTCCAAGGATTATGAGAAGTGCAATTCAGTTCA
TTTCCTCGCATTGGCCCTATTGGAACAGGACAGAGGGGGCAGACCATTTCTTTGTTGTGCCACATGATTTCGGAGCATGC
TTCCATTATCAGGAAGAGAAGGCCATTGAGCGGGGAATCCTGCCATTGCTTCGCCGTGCAACGCTGGTCCAGACTTTTGG
GCAGAAGGATCATGTCTGCCTCAAGGAAGGGTCCATCACCATCCCACCATATGCTCCTCCTCAGAAGATGAAAACTCACC
TTGTTCCCCCAGAGACACCTCGATCCATCTTTGTCTATTTCCGTGGTTTATTCTACGATACCGCAAATGATCCTGAGGGT
GGTTACTATGCAAGAGGTGCCCGTGCATCGGTGTGGGAGAACTTCAAGAACAATCCTCTTTTTGACATCTCCACAGACCA
CCCACCAACCTACTACGAGGACATGCAGCGTTCCATCTTCTGCTTGTGCCCTCTAGGCTGGGCTCCGTGGAGCCCCCGTT
TGGTTGAAGCCGTTGTGTTTGGCTGCATTCCAGTGATCATTGCAGACGACATCGTCCTACCTTTTGCGGACGCGATCCCA
TGGGATGAGATCGGTGTATTTGTGGCGGAGGACGACGTCCCAAAGCTGGACACCATCCTGACATCGATACCGATGGATGT
GATCCTGCGGAAGCAGAGGCTGCTAGCGAACCCGTCGATGAAGCAGGCCATGCTGTTCCCGCAGCCCGCCCAGCCAGGTG
ACGCCTTCCACCAGATACTCAACGGGCTGGGACGGAAGCTTCCACACCCGAAGAGCGTGTACCTGGACCCGGGGCAGAAG
GTGCTGAACTGGACCCAGGGCCCGGTGGGTGACCTGAAGCCATGGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza brachyantha | OB01G51480 | ortholog_one2one | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG400014472 | ortholog_many2many | 1 retrogene | |
| Solanum lycopersicum | Solyc12g042360.1 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_olon_4 | 78.80 | 92.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all KN538848.1_FG012 retrocopies