Parental gene: | Solyc12g042360.1 |
| Aliases: | None |
| Description: | None |
| Organism: | Tomato (Solanum lycopersicum) |
| Coordinates: | 12:40337965..40343505(-) |
>Solyc12g042360.1
ATGTTTGCTGCAGAGATCTATATGCATCGGTTCCTCTTATCTAGCCCTGTACGAACCCTTAATCCTGAGGAAGCTGATTG
GTTCTACACCCCTGTTTACACCACTTGTGACCTGACACCTAATGGCCTTCCTTTACCCTTCAAGTCACCACGAATGATGA
GGAGCGCAATACAACTTATTGCTTCTAACTGGCCTTATTGGAATAGGACAGAGGGTGCTGATCACTTCTTCATTGTCCCA
CACGATTTTGCTGCTTGTTTTCATTATCAAGAGGAAAAAGCTATTGGGAGGGGAATTCTTCCGTTGCTCCAGCGTTCAAC
TTTAGTTCAAACTTTTGGACAAAGAAATCATGTGTGTTTGAAGGATGGTTCAATTACAATTCCTCCCTATGCTCCTCCAC
AGAAAATGCAATCCCACTTCATCCCTCCAGATATTCCGCGATCCATCTTTGTTTACTTCCGTGGCTTGTTCTATGATGTA
GGAAATGATCCAGAAGGTGGTTATTATGCGAGAGGTGCCCGGGCAGCAGTATGGGAGAACTTTAAGGACAATCCTCTCTT
TGATATTTCCACAGAGCATCCAACTACCTACTACGAGGACATGCAACGAGCCATCTTTTGCTTGTGCCCACTTGGGTGGG
CACCATGGAGCCCAAGATTGGTTGAAGCAGTTATATTTGGATGCATCCCTGTTATCATTGCAGATGATATTGTCTTGCCA
TTTGCTGATGCAATCCCCTGGGAAGAGATTGGTGTTTTTGTAGACGAGAAGGACGTTCCAAATTTGGATACTATTCTCAC
TTCTATTCCACCAGAGGAAATATTGAGGAAGCAGAGATTACTTGCTAACCCTTCAATGAAACAGGCTATGTTGTTTCCAC
AACCTGCTCAATCAGGTGATGCTTTCCATCAAATTTTGAATGGACTTGCTCGTAAACTGCCACATGACAGAACCGTTTTC
TTGACTCCTGGGCAGAAGATCTTAAACTGGACTGCTGGTCCAGTTGGTGACCTAAAACCTTGGTAA
ATGTTTGCTGCAGAGATCTATATGCATCGGTTCCTCTTATCTAGCCCTGTACGAACCCTTAATCCTGAGGAAGCTGATTG
GTTCTACACCCCTGTTTACACCACTTGTGACCTGACACCTAATGGCCTTCCTTTACCCTTCAAGTCACCACGAATGATGA
GGAGCGCAATACAACTTATTGCTTCTAACTGGCCTTATTGGAATAGGACAGAGGGTGCTGATCACTTCTTCATTGTCCCA
CACGATTTTGCTGCTTGTTTTCATTATCAAGAGGAAAAAGCTATTGGGAGGGGAATTCTTCCGTTGCTCCAGCGTTCAAC
TTTAGTTCAAACTTTTGGACAAAGAAATCATGTGTGTTTGAAGGATGGTTCAATTACAATTCCTCCCTATGCTCCTCCAC
AGAAAATGCAATCCCACTTCATCCCTCCAGATATTCCGCGATCCATCTTTGTTTACTTCCGTGGCTTGTTCTATGATGTA
GGAAATGATCCAGAAGGTGGTTATTATGCGAGAGGTGCCCGGGCAGCAGTATGGGAGAACTTTAAGGACAATCCTCTCTT
TGATATTTCCACAGAGCATCCAACTACCTACTACGAGGACATGCAACGAGCCATCTTTTGCTTGTGCCCACTTGGGTGGG
CACCATGGAGCCCAAGATTGGTTGAAGCAGTTATATTTGGATGCATCCCTGTTATCATTGCAGATGATATTGTCTTGCCA
TTTGCTGATGCAATCCCCTGGGAAGAGATTGGTGTTTTTGTAGACGAGAAGGACGTTCCAAATTTGGATACTATTCTCAC
TTCTATTCCACCAGAGGAAATATTGAGGAAGCAGAGATTACTTGCTAACCCTTCAATGAAACAGGCTATGTTGTTTCCAC
AACCTGCTCAATCAGGTGATGCTTTCCATCAAATTTTGAATGGACTTGCTCGTAAACTGCCACATGACAGAACCGTTTTC
TTGACTCCTGGGCAGAAGATCTTAAACTGGACTGCTGGTCCAGTTGGTGACCTAAAACCTTGGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza longistaminata | KN538848.1_FG012 | ortholog_many2many | 1 retrogene | |
| Oryza brachyantha | OB01G51480 | ortholog_many2many | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG400014472 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_slyc_19 | 86.59 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Solyc12g042360.1 retrocopies