Parental gene: | OB01G51480 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza brachyantha |
| Coordinates: | 1:31754441..31757487(-) |
>OB01G51480
ATGGCGCTCGCCTTGCGGCGGGCGGGGCGGGGGGCCCGGCTTCTAGCTGCGACTTGGGAGGTTGCGAGTGGGCAGGACAC
CGAGAGGATCGAAGGGAGTGCGGGTGATGTGCTGGAAGATGACCCTGTCGGGAGGCTTAAGGTGTATGTCTACGAGTTGC
CCACCAAATACAACAAGAAGATGGTGGCAAAAGATTCCAGATGCCTCAGCCACATGTTTGCTGCAGAGATTTTCATGCAT
CGCTTCCTGTTGTCAAGTGCGATCCGGACTTTGAACCCGGAGGAAGCTGATTGGTTCTATACTCCAGTATATACGACATG
TGATCTTACTCCTTGGGGTCATCCCTTGCCATTCAAGTCTCCACGGATTATGAGAAGTGCAATTCAGTTTATTTCGTCGC
ATTGGCCCTATTGGAACAGGACAGAGGGGGCAGATCATTTCTTTGTTGTGCCACATGATTTTGGAGCATGCTTCCATTAT
CAGGAAGAGAAGGCCATCGAGCGAGGAATCCTGCCATTGCTTCGCCGTGCAACGCTGGTCCAGACTTTTGGGCAAAAGGA
TCATGTATGCCTCAAGGAAGGATCCATCACTATCCCACCATATGCTCCTCCTCAGAAGATGAAAACTCACCTTGTTCCCC
CAGAGACACCTCGATCCATCTTTGTCTATTTCCGTGGTTTATTCTATGATACTGCAAATGATCCTGAGGGTGGTTATTAT
GCAAGAGGTGCCCGTGCATCTGTGTGGGAGAACTTCAAGAACAATCCCCTTTTTGACATCTCAACTGACCACCCACCAAC
CTACTACGAGGACATGCAGCGTTCCATCTTCTGCTTGTGCCCTCTTGGCTGGGCTCCATGGAGCCCCCGGTTGGTTGAAG
CCGTTGTGTTTGGCTGCATTCCGGTGATCATTGCAGACGACATCGTCCTACCTTTTGCCGATGCGATCCCATGGGACGAG
ATCGGTGTATTTGTGGCAGAGGACGACGTCCCAAAGCTGGACACCATCCTGACATCGATACCAATGGAGGTGATCCTGCG
GAAGCAGAGGTTGCTAGCAAACCCGTCGATGAAGCAGGCCATGCTGTTCCCACAGCCTGCTCAGCCGGGTGACGCCTTCC
ACCAAATACTGAATGGGCTGGGGCGAAAGCTTCCGCACGACAAGAGCGTCTACCTGAGTCCAGGGCAGAAGTTGCTGAAC
TGGACCCAGGGCCCGGTGGGTGACCTGAAGCCATGGTAG
ATGGCGCTCGCCTTGCGGCGGGCGGGGCGGGGGGCCCGGCTTCTAGCTGCGACTTGGGAGGTTGCGAGTGGGCAGGACAC
CGAGAGGATCGAAGGGAGTGCGGGTGATGTGCTGGAAGATGACCCTGTCGGGAGGCTTAAGGTGTATGTCTACGAGTTGC
CCACCAAATACAACAAGAAGATGGTGGCAAAAGATTCCAGATGCCTCAGCCACATGTTTGCTGCAGAGATTTTCATGCAT
CGCTTCCTGTTGTCAAGTGCGATCCGGACTTTGAACCCGGAGGAAGCTGATTGGTTCTATACTCCAGTATATACGACATG
TGATCTTACTCCTTGGGGTCATCCCTTGCCATTCAAGTCTCCACGGATTATGAGAAGTGCAATTCAGTTTATTTCGTCGC
ATTGGCCCTATTGGAACAGGACAGAGGGGGCAGATCATTTCTTTGTTGTGCCACATGATTTTGGAGCATGCTTCCATTAT
CAGGAAGAGAAGGCCATCGAGCGAGGAATCCTGCCATTGCTTCGCCGTGCAACGCTGGTCCAGACTTTTGGGCAAAAGGA
TCATGTATGCCTCAAGGAAGGATCCATCACTATCCCACCATATGCTCCTCCTCAGAAGATGAAAACTCACCTTGTTCCCC
CAGAGACACCTCGATCCATCTTTGTCTATTTCCGTGGTTTATTCTATGATACTGCAAATGATCCTGAGGGTGGTTATTAT
GCAAGAGGTGCCCGTGCATCTGTGTGGGAGAACTTCAAGAACAATCCCCTTTTTGACATCTCAACTGACCACCCACCAAC
CTACTACGAGGACATGCAGCGTTCCATCTTCTGCTTGTGCCCTCTTGGCTGGGCTCCATGGAGCCCCCGGTTGGTTGAAG
CCGTTGTGTTTGGCTGCATTCCGGTGATCATTGCAGACGACATCGTCCTACCTTTTGCCGATGCGATCCCATGGGACGAG
ATCGGTGTATTTGTGGCAGAGGACGACGTCCCAAAGCTGGACACCATCCTGACATCGATACCAATGGAGGTGATCCTGCG
GAAGCAGAGGTTGCTAGCAAACCCGTCGATGAAGCAGGCCATGCTGTTCCCACAGCCTGCTCAGCCGGGTGACGCCTTCC
ACCAAATACTGAATGGGCTGGGGCGAAAGCTTCCGCACGACAAGAGCGTCTACCTGAGTCCAGGGCAGAAGTTGCTGAAC
TGGACCCAGGGCCCGGTGGGTGACCTGAAGCCATGGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza longistaminata | KN538848.1_FG012 | ortholog_one2one | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG400014472 | ortholog_many2many | 1 retrogene | |
| Solanum lycopersicum | Solyc12g042360.1 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_obra_20 | 78.22 | 92.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OB01G51480 retrocopies