Parental gene:

MTR_8g039540

Aliases:None
Description:aspartic proteinase nepenthesin-like protein
Organism:Barrel medic (Medicago truncatula)
Coordinates:8:14701625..14705725(+)


>MTR_8g039540
ATGAAAATCCCAATTTTTCTAACACCTTTCCTTCTCTGCCTCTTCATCTCCCTAGTCCAAGCACAAACCCCAAAATGTGA
CATCCAAGATGATGGCTCAACACTCAAAGTGTTCCATATCTTCAGCCAATGTTCTCCATTCAAACCATCAAAACCAATGT
CATGGGAAGAAAGTGTCCTAAACCTACAAGCTAAAGACCAAGCTAGAATGCAATACTTCTCCAGCTTAGTTGCTAGGAAA
TCAGTTGTACCAATTGCATCAGCAAGACAAATAATTCAAAGTCCAACATACATTGTTAAGGCTAAGTTTGGTACTCCACC
TCAAACTTTGCTTTTGGCTTTGGATACTAGTAGTGATGCTGCTTGGATTCCTTGTTCCGGTTGTGTTGGTTGTTCAACAT
CAAAACCTTTTGCTCCTATTAAGTCCACAAGTTTTAGGAATGTTAGCTGTGGTTCTCCTCATTGCAAACAGGTACCCAAC
CCCACTTGCGGTGGAAGCGCGTGTGCATTCAACTTCACTTATGGTAGTTCTTCCATTGCAGCTAGTGTGGTCCAAGACAC
ACTTACCCTAGCAACTGACCCAATTCCAGGGTACACTTTTGGCTGTGTTAACAAAACAACAGGAAGTTCAGCACCACAAC
AAGGGCTATTGGGCTTGGGCCGAGGCCCATTGTCGCTCTTGTCCCAAAGCCAAAATCTCTACAAGTCCACATTCTCTTAC
TGTTTGCCTAGCTTTAAGTCGATTAACTTTAGTGGGTCGTTGAGACTTGGGCCAGTGTATCAGCCTAAGAGGATCAAGTA
TACCCCACTTCTCAGAAACCCTAGAAGATCGTCACTCTATTATGTTAACTTGGTTGCTATTAAAGTTGGTCGAAAAATCG
TCGATATCCCTCCTGCAGCGCTAGCCTTCAACCCGACTACCGGTGCCGGGACCATTTTTGATTCAGGTACCGTATTTACT
CGACTAGCTGAACCGGTATACACCGCCGTAAGAAACGAGTTTCGCCGACGAGTTGGCCCAAAACTACCTGTGACAACCCT
AGGAGGGTTCGACACATGCTACAATGTCCCAATAGTTGTACCAACTATAACATTCTTGTTCTCAGGCATGAATGTAACAC
TACCACCAGACAACATCGTCATACACAGCACCGCCGGTAGCACAACATGTTTGGCCATGGCAGGAGCACCCGATAACGTG
AACTCGGTGTTGAACGTGATAGCCAACATGCAACAACAAAACCACCGTGTGCTATTTGATGTACCCAACTCAAGAATTGG
TATTGCTCGTGAGCTTTGCACCTAA

Species Parental gene accession Homology type Retrogenes number
Brassica oleracea Bo8g083640 ortholog_many2many 1 retrogene
retro_bole_10,
Brassica rapa Bra014819 ortholog_many2many 1 retrogene
retro_brap_21,
Populus trichocarpa POPTR_0001s06560 ortholog_many2many 1 retrogene
retro_ptri_13,
Prunus persica PRUPE_ppa005966mg ortholog_one2many 1 retrogene
retro_pper_11,
Theobroma cacao TCM_045111 ortholog_one2many 1 retrogene
retro_tcac_5,
Vitis vinifera VIT_13s0084g00820 ortholog_one2many 1 retrogene
retro_vvin_28,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mtru_20 55.30 99.77
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Download FASTA sequences of all MTR_8g039540 retrocopies