Parental gene: | ORUFI01G32100 |
| Aliases: | None |
| Description: | None |
| Organism: | Brownbeard rice (Oryza rufipogon) |
| Coordinates: | 1:27446974..27451730(+) |
>ORUFI01G32100
ATGGCCGCCTCCAGAAGCGAGCTTCTCCGGCCGGCATTCGGCGAGCCCTCTCCTTCGCTAGGACCATTCGTCGTTAACCC
TCACACCTGCAGCTACAGGTGGTGGCAGAAGTTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCGTCGCCGTTCGAGC
TGGCCATGGAGAAGTCGGCCTCGGCCGCGCTCGCCGTCACGGAGCTGGTGGTCGACGCCTTCTTCGCCGTCGACATTGCC
GTCTCCTTCTTCGTGGCGTACCGCGACGCCTCCACCGGCCTCCTCGTAACCGACCGCAAGAAGATCGCCACCAGACAAGC
ATTGTATGGGTTGCTCAATCTTCTCCGGCTCTGGCGATTACGGCGCGTCAGCAAGCTCTTTGCAAGGTTGGAGAAGGACA
TTAGATTCAGTTACTTGTGGACCAGGCTTATCAAGCTCCTCTACGTGACGCTGTTCGCAGTGCACTTCGCCTCGTGCATC
TACCTGTGGATGGCGTTCCACCACAAGGCGAAGGAGCTGACGTGGATCGGCAGCCAGTTCCACGGCTTCGAGGACCGCAG
CGTGTGGTTCTGCTACACCTGCGCCGTGTACTGGTCCATCACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCTG
CCAACACGGGCGAGATGCTGTTCAGCATCGCCTTCATGCTCTTCAACATGGGCCTCACCTCCTACATCATCGGCAACATC
ACCAACCTCGTCGTCCACGAAACCGCCAACACCTTCAAGATGAGGGACATGGTGCAGAGGACGTCGGTGTTCGGGAGAAC
GAACCGGCTGCCGGTGGCGATGAGGGAGCAGATGATGGAAAGCCTGCAGCTCAGGTTCAGGGCGGAGGAGCAGCTGCAGC
AGGAGATGCTGTCCGAGCTGCCCAAGGCCGTGCGGTCAGGCATCGCGCAGCACATGTTCAGGGGGGCGGTCCAGAGCTGC
TACCTGTTCCAGGGCGTCTCCGACAAGCTCGTCCTGCCGCTGGTCGCGGAGATGAAGGCAGAGTCATTTCCCCCCAAGGC
GGATATCATCCTGGAGAACGAGGCTTCGACGGACTGCTACATCATCGTGTCTGGTGAAGTGGAGGTATTGACAACCCTTG
AGGATGGTACAGAGAAGCAAGTGATGAGAATAGGGCCACGGGGAATGGCAGGGGAAATTGGGGTGATGTTCAACATCCCA
CAGCCGTTCACCATCCGGAGCAGAAAGCTCACGCAGCTCGCCCGTATAAGCCACAGCCATATGGTCCAGACCATCCGGCC
TAACACTGCAGATGGGGTCGTTGTATTCTCCAATTTTGTTCTGTTCACAATTTCTCACAACGTTTTTCAGTACCTTGAAT
CTCTGAAGGTGAAGGCAAAGGAAACAACCTTTGTTAGGGATCATCTTCGCAATGGCTACTCCACGGTATTAGGAAGTGCA
ACCATGTTTGATGTAGATGAATCCAAAGAGTCAGCTCACAAAATGTTGCCATGCAAAGAACCCAAACGGGTATCTATTCA
TGAACACCTCTTAAATGGGACTGGCACAGCACTGAACGGCTCATCTGGGAAGCTCGTCATACTGCCAGATTCTATGCAAG
ATCTGATGAAACTTTCAGAAAAGAAGTTTGGGAAGGCAGCGAGAGGGATTCTCACCGTGGGAGGTGCCGAGGTAGAGGAC
ATTGAAGTGATAAGAGATGGCGATCACCTGTTCTTTAGTTGGTAG
ATGGCCGCCTCCAGAAGCGAGCTTCTCCGGCCGGCATTCGGCGAGCCCTCTCCTTCGCTAGGACCATTCGTCGTTAACCC
TCACACCTGCAGCTACAGGTGGTGGCAGAAGTTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCGTCGCCGTTCGAGC
TGGCCATGGAGAAGTCGGCCTCGGCCGCGCTCGCCGTCACGGAGCTGGTGGTCGACGCCTTCTTCGCCGTCGACATTGCC
GTCTCCTTCTTCGTGGCGTACCGCGACGCCTCCACCGGCCTCCTCGTAACCGACCGCAAGAAGATCGCCACCAGACAAGC
ATTGTATGGGTTGCTCAATCTTCTCCGGCTCTGGCGATTACGGCGCGTCAGCAAGCTCTTTGCAAGGTTGGAGAAGGACA
TTAGATTCAGTTACTTGTGGACCAGGCTTATCAAGCTCCTCTACGTGACGCTGTTCGCAGTGCACTTCGCCTCGTGCATC
TACCTGTGGATGGCGTTCCACCACAAGGCGAAGGAGCTGACGTGGATCGGCAGCCAGTTCCACGGCTTCGAGGACCGCAG
CGTGTGGTTCTGCTACACCTGCGCCGTGTACTGGTCCATCACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCTG
CCAACACGGGCGAGATGCTGTTCAGCATCGCCTTCATGCTCTTCAACATGGGCCTCACCTCCTACATCATCGGCAACATC
ACCAACCTCGTCGTCCACGAAACCGCCAACACCTTCAAGATGAGGGACATGGTGCAGAGGACGTCGGTGTTCGGGAGAAC
GAACCGGCTGCCGGTGGCGATGAGGGAGCAGATGATGGAAAGCCTGCAGCTCAGGTTCAGGGCGGAGGAGCAGCTGCAGC
AGGAGATGCTGTCCGAGCTGCCCAAGGCCGTGCGGTCAGGCATCGCGCAGCACATGTTCAGGGGGGCGGTCCAGAGCTGC
TACCTGTTCCAGGGCGTCTCCGACAAGCTCGTCCTGCCGCTGGTCGCGGAGATGAAGGCAGAGTCATTTCCCCCCAAGGC
GGATATCATCCTGGAGAACGAGGCTTCGACGGACTGCTACATCATCGTGTCTGGTGAAGTGGAGGTATTGACAACCCTTG
AGGATGGTACAGAGAAGCAAGTGATGAGAATAGGGCCACGGGGAATGGCAGGGGAAATTGGGGTGATGTTCAACATCCCA
CAGCCGTTCACCATCCGGAGCAGAAAGCTCACGCAGCTCGCCCGTATAAGCCACAGCCATATGGTCCAGACCATCCGGCC
TAACACTGCAGATGGGGTCGTTGTATTCTCCAATTTTGTTCTGTTCACAATTTCTCACAACGTTTTTCAGTACCTTGAAT
CTCTGAAGGTGAAGGCAAAGGAAACAACCTTTGTTAGGGATCATCTTCGCAATGGCTACTCCACGGTATTAGGAAGTGCA
ACCATGTTTGATGTAGATGAATCCAAAGAGTCAGCTCACAAAATGTTGCCATGCAAAGAACCCAAACGGGTATCTATTCA
TGAACACCTCTTAAATGGGACTGGCACAGCACTGAACGGCTCATCTGGGAAGCTCGTCATACTGCCAGATTCTATGCAAG
ATCTGATGAAACTTTCAGAAAAGAAGTTTGGGAAGGCAGCGAGAGGGATTCTCACCGTGGGAGGTGCCGAGGTAGAGGAC
ATTGAAGTGATAAGAGATGGCGATCACCTGTTCTTTAGTTGGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA004342 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB01G37960 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G29050 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G33050 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA01G33130 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0718700 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si003861m.g | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oruf_17 | 79.94 | 59.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORUFI01G32100 retrocopies