RetrogeneDB ID: | retro_amel_811 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192656.1:1445767..1446143(+) | ||
Located in intron of: | ENSAMEG00000012746 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000001801 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.64 % |
Parental protein coverage: | 85.81 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KDGDGTITTKELGTV-MRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREA |
K..DGT.TTK..GT..MRSLGQNP..EAELQD.I.E.D.DG.GT.DFPE.LT.M.RK.KDT..EEEIREA | |
Retrocopy | KAADGTTTTKGSGTG<MRSLGQNPQ<EAELQDVIHE-DDDGIGTTDFPELLTVMVRKTKDTGNEEEIREA |
Parental | FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA |
FRVF..DGNG.I.AAEL.H..TNLGEKLTDE.VDE.IREAD.D.DGQVNYE.FVQ.MTA | |
Retrocopy | FRVFA*DGNGCIRAAELCHRVTNLGEKLTDEKVDEIIREADMDRDGQVNYERFVQKMTA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |