RetrogeneDB ID: | retro_amel_421 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192434.1:1650491..1650928(-) | ||
Located in intron of: | ENSAMEG00000006536 | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000006547 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM3 | ||
Ensembl ID: | ENSAMEG00000008565 | ||
Aliases: | None | ||
Description: | calmodulin 3 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1449] |
Percent Identity: | 76. % |
Parental protein coverage: | 98.67 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | ADQLTEEQIAEFKEAFSLFDKDGDG-TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL |
ADQLT.EQ.AEF.EAFSLFDKDG...TITTKELGTV.RSLGQ.PT.A.LQDMI.EVDADGNGTIDFPEFL | |
Retrocopy | ADQLTDEQTAEFTEAFSLFDKDGGA<TITTKELGTVTRSLGQSPTGATLQDMISEVDADGNGTIDFPEFL |
Parental | TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE-LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY |
TM.ARKMK.TD.EEEIREAF.VFDKDG.GYI.AA....HV........TDEE.DEMIREA..DG.GQV.Y | |
Retrocopy | TMVARKMKGTDGEEEIREAFQVFDKDGTGYIRAAGYITHVQLR---RKTDEEGDEMIREAATDGVGQVSY |
Parental | EEFVQMMTAK |
EEFVQMMT.. | |
Retrocopy | EEFVQMMTTE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |