RetrogeneDB ID: | retro_chof_1328 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_263378:1054..1876(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000009274 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.21 % |
Parental protein coverage: | 96.17 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | WLLSHTEHRPQVAVICGSGLGGLADKVTQAQAFEYSEIPNFPQSTVPGHAGRLVFGFLNGRACVVMQGRF |
WLLSH.EH.PQ.AVICGSGLGGLADKVTQAQAFEYSEIPNFPQSTVP.HAGRLVFGFLNGRACVV.QGRF | |
Retrocopy | WLLSHIEHPPQGAVICGSGLGGLADKVTQAQAFEYSEIPNFPQSTVPRHAGRLVFGFLNGRACVVIQGRF |
Parental | HFYEGYPLWKFAFKVTFPARVFRLMGVDILVVTNAAGGLNPRFEVGDIMLIRDHINMLGFSGQSPLRGPN |
HFYEGYPLW....KV.FP.RVF.LMGVD.LVVTNAAGGLNPRFEVGDIM.IRDHINMLGF.GQ.PLRGP. | |
Retrocopy | HFYEGYPLW----KVIFPVRVFQLMGVDTLVVTNAAGGLNPRFEVGDIMMIRDHINMLGFFGQNPLRGPS |
Parental | DERFGPRFPAVSDAYDHNLRQKAHCAWKQMGEQ-EL-EGTYVMAGGPNFETIAECHLLLNLGADAVGMST |
DERFGPRFP.VSDAYD.NLRQKAH.AWKQMGEQ.EL.EGT.VM.GGPNFETIAEC.LLLNLGADAVGMST | |
Retrocopy | DERFGPRFPVVSDAYDRNLRQKAHWAWKQMGEQ*ELQEGTCVMLGGPNFETIAECRLLLNLGADAVGMST |
Parental | VPEVIVARHCGLRVFGFSLITNKVIMSYKSLEKANHEEVLQSGKQAAQKLEQFVSILMATIPPSDKAI |
VP.VIVARHCGLRVFGFSLITNKVIMSY.SLEKANHEEVL.S.KQAAQKLEQFVSILMA.IPPSDKAI | |
Retrocopy | VPQVIVARHCGLRVFGFSLITNKVIMSYESLEKANHEEVLESAKQAAQKLEQFVSILMANIPPSDKAI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |