RetrogeneDB ID: | retro_ogar_594 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873524.1:27875342..27875971(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000013344 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61.47 % |
Parental protein coverage: | 73.36 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | LVFGILSGKVCVMM-QGRFHAYEGYPLWKVTFPIRVFQLIGVDT--LVVTNAAGGLNPKFEVGDIMLIRD |
L..G.L...VCVM..QGRFH...G.PLWKVTF..RVFQL..V.T.........GGLNPK.EVGD.MLIRD | |
Retrocopy | LLVGNLDSRVCVMT<QGRFHTSKGNPLWKVTFLVRVFQLT*VWTPWWLAPQLEGGLNPKSEVGDTMLIRD |
Parental | HINLPGFCGQNPLIGPNDERFGVRFPAMSDAYDRTMQEKALITWKQM-GEKRALQEGTYVMLTGP-NFET |
HINLPGFCG.NPLIGP.DE.FGV.FPAMSDA.......KAL..WKQ...E..AL..GT......P.N.E. | |
Retrocopy | HINLPGFCGENPLIGPTDE-FGVPFPAMSDAGEQPRRQKALSAWKQT<EEE*ALRAGT*GVVWTP<NYEN |
Parental | VAECRLLQKLGADAVGMSTVPEVIVARH-CGLRVFGFSLITNKVVMDYESLETANHEEVLEAGKQAAQKL |
..E.RL.Q.L.ADAVGMSTVPEV.VARH.C.L.VF.FSLIT.KV...Y.SLE.ANH..VLEA.KQAA.K. | |
Retrocopy | -EESRLMQTLEADAVGMSTVPEVTVARH<CSLGVFCFSLITSKVITYYQSLEKANHTQVLEARKQAAKKW |
Parental | EKFVTTLV |
.K.VT... | |
Retrocopy | -KLVTSIL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |