RetrogeneDB ID: | retro_meug_211 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_6236:12388..13232(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PNP | ||
Ensembl ID: | ENSMEUG00000014512 | ||
Aliases: | None | ||
Description: | purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:7892] |
Percent Identity: | 75.86 % |
Parental protein coverage: | 99.31 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | FKYEDYKETAEWLLSHTKYRPEIAVICGSGLGGLADKLTQFQAFDYNEIPNFPQSTVPGHA-GKLVFGYL |
FKYEDYK.TAE.LLSHTKY.P.IAVICGSGL.GL.D.LTQFQ.FDYNE.PNF.QSTVPGHA.G.L.FGYL | |
Retrocopy | FKYEDYKKTAE*LLSHTKYLPKIAVICGSGLDGLMDRLTQFQVFDYNETPNFSQSTVPGHA>G*LIFGYL |
Parental | NDKCCVMMQGRFHSYEGYSLWKLTPQVAFPVRVFRLLDVHTLIVTNAAGGLNPKYEVGDVMLIRDHINLA |
NDKCCVMMQG.FH.YEG..LWK....VAFPVR.F.L..V.TLIVT.AAGGLNPK.EVGDVMLI.DHI.LA | |
Retrocopy | NDKCCVMMQGQFHPYEGHPLWK----VAFPVRIFQLMNVRTLIVTDAAGGLNPKCEVGDVMLIQDHIHLA |
Parental | GLSGQNPLRGPNDDRFGERFPPMSDAYDRILRQKAHSIWKQMEQERPLQEGTYVMVGGPNFETIAECRFL |
G.SGQNPLR.P.D.RF.ERFP..SDA.DRILRQKAH..WK.MEQE...QEGTYVMV.....ET.AE.RFL | |
Retrocopy | GFSGQNPLRSPSDERFRERFPSISDAHDRILRQKAHCLWKKMEQE*RWQEGTYVMV----VETTAEYRFL |
Parental | HKLGADAVGMSTVPEVIVARHCGIRVFGFSLITNKSVLDYESQEIANHEEVLEAGRLAAEKLEGLVCKLV |
.KLGADAVGMST.PEVIVAR.CGI.VF.FSL..NKSVLDYESQE...HEEV..AGRLAA..LE.LVC.L. | |
Retrocopy | QKLGADAVGMSTAPEVIVARYCGIQVF*FSLVMNKSVLDYESQETTSHEEVIVAGRLAAKTLEQLVCTLL |
Parental | ATM-PPSEKT |
.TM.PPSEKT | |
Retrocopy | ETMQPPSEKT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |