RetrogeneDB ID: | retro_chof_36 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_59306:7441..7984(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000000848 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARF4 | ||
Ensembl ID: | ENSCHOG00000006427 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor 4 [Source:HGNC Symbol;Acc:655] |
Percent Identity: | 74.85 % |
Parental protein coverage: | 95. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SLFSRIFRESQMDVVRFGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRP |
.LF...F....M.....GL.AAGKT.ILYKLKLGEIVTTIPTIGF.VETVEYKNI.F.VWDVGGQDKI.P | |
Retrocopy | NLFKGLFGKKEMCILMVGLNAAGKT-ILYKLKLGEIVTTIPTIGFKVETVEYKNISFAVWDVGGQDKIWP |
Parental | LWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQ |
LWRHYFQNTQGLIFVVDSNDRER..E...EL..ML.EDELRDAVLL.FANKQDL.NAM...E.T.KLGL. | |
Retrocopy | LWRHYFQNTQGLIFVVDSNDRERVNEAHKELMRMLAEDELRDAVLLVFANKQDLLNAMNAAEITEKLGLH |
Parental | SLRNRTWYVQATCATQGTGLYEGLDWLSNEL |
S...R.WY.QATCAT.G.GLYEGLDWLSN.L | |
Retrocopy | SPCHRNWYIQATCATSGDGLYEGLDWLSNQL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |