RetrogeneDB ID: | retro_etel_2156 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_79754:3015..3657(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000000746 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UCP2 | ||
Ensembl ID: | ENSETEG00000014773 | ||
Aliases: | None | ||
Description: | uncoupling protein 2 (mitochondrial, proton carrier) [Source:HGNC Symbol;Acc:12518] |
Percent Identity: | 96.26 % |
Parental protein coverage: | 69.16 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | RIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVDAYKT |
RIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVDAYKT | |
Retrocopy | RIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVDAYKT |
Parental | IAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDSLLKANLMTDDLPCHFISAFGAGFCTTVIASPV |
IA..EGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDSLLKA.LMTDDLPCHFISAFGAGFCTTVIASPV | |
Retrocopy | IAL*EGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDSLLKAKLMTDDLPCHFISAFGAGFCTTVIASPV |
Parental | DVVKTRYMNSALGQYSSAGNCALTMLQKEG-RAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYTSR |
DVVKTRY.NSALGQYSSAGNCALTMLQKEG.RAFYKGFMPSFLRLGSWNVVMFVTYE.LKRAL.AAYTSR | |
Retrocopy | DVVKTRYINSALGQYSSAGNCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEELKRALTAAYTSR |
Parental | EALF |
EA.F | |
Retrocopy | EAPF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Echinops telfairi | ENSETEG00000014773 | 1 retrocopy |
retro_etel_2156 ,
|
Macropus eugenii | ENSMEUG00000011481 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000007498 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000001700 | 1 retrocopy |