RetrogeneDB ID: | retro_meug_2102 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold90555:2993..3773(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000006571 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UCP2 | ||
Ensembl ID: | ENSMEUG00000011481 | ||
Aliases: | None | ||
Description: | uncoupling protein 2 (mitochondrial, proton carrier) [Source:HGNC Symbol;Acc:12518] |
Percent Identity: | 94.25 % |
Parental protein coverage: | 84.47 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AIRASSSTAQYRGVMGTILTMVKTEGPGSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGS |
AIRASSSTAQYRGVM...LTMVKTE.PGSLYNGLVAGLQ.QMSFASV.IGLYDSVKQFYTKGSEHAGIGS | |
Retrocopy | AIRASSSTAQYRGVMAH-LTMVKTEVPGSLYNGLVAGLQPQMSFASVLIGLYDSVKQFYTKGSEHAGIGS |
Parental | RLLAGCTTGALAVGVAQPTDVVKVRFQAQARAGGSRRYQGTVDAYKTIAREEGLRGLWKGTSPNVARNAI |
.LLAGC.TGALAVGVAQPTDVVKVRFQAQARA.GS.RYQGTVDAYKTIAREEGLRGLWK.TSPNV.RNAI | |
Retrocopy | HLLAGCITGALAVGVAQPTDVVKVRFQAQARACGSWRYQGTVDAYKTIAREEGLRGLWKETSPNVSRNAI |
Parental | VNCAELVTYDIIKDALLKAHLMTDDLPCHFTSAFGAGFCTTIIASPVDVVKTRYMNSAVGQYASAGHCAL |
VNCAELVTYDIIKDALLKAHLMTDDLPCHFTSAFGAGFCTTIIASPVDVVKTRYMNSA.GQYASAGHCAL | |
Retrocopy | VNCAELVTYDIIKDALLKAHLMTDDLPCHFTSAFGAGFCTTIIASPVDVVKTRYMNSAAGQYASAGHCAL |
Parental | TMLRKEGPQAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAACTSREAPF |
TMLRKEGPQAFYKGFMPSFLRLGSWNVV.FVTYEQLKRALMAA.TSREAPF | |
Retrocopy | TMLRKEGPQAFYKGFMPSFLRLGSWNVVIFVTYEQLKRALMAARTSREAPF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Echinops telfairi | ENSETEG00000014773 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000011481 | 2 retrocopies |
retro_meug_2102 , retro_meug_505,
|
Monodelphis domestica | ENSMODG00000007498 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000001700 | 1 retrocopy |