RetrogeneDB ID: | retro_etel_787 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_164215:3097..3491(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFA12 | ||
Ensembl ID: | ENSETEG00000010118 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Source:HGNC Symbol;Acc:23987] |
Percent Identity: | 61.19 % |
Parental protein coverage: | 90.91 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MEYLRVLKRGLQQVSGHGGLRSYLRVFFRANDTKVGTLVGEDKYGNKYYEDNKQF-FGRHRWVMYTTEMN |
MEY..VLKRGLQQVS....L..Y...FFRAND..VGTLVGEDKY..KYYED.K...F..H..V..TTEM. | |
Retrocopy | MEYWQVLKRGLQQVSSRSSLQGYVQAFFRANDVRVGTLVGEDKYEHKYYEDHKRV<FDGHQQVRHTTEMQ |
Parental | GKNTFWDVDGSMVPPEWHRWLHCVTDPPI-TKASTVCQFMWASHK-FNESGTPEQYVP-STSRK |
G.N..WDV.GSMVPPEW.RWLHC.TD....TK..T.C...W..HK.....GTPEQYVP..T.RK | |
Retrocopy | GRNPIWDVNGSMVPPEWYRWLHCITDNLLTTKPPTACKAVWVNHK<VSLGGTPEQYVP*YTTRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |