RetrogeneDB ID: | retro_sara_442 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_208974:760..1159(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFA12 | ||
Ensembl ID: | ENSSARG00000013220 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Source:HGNC Symbol;Acc:23987] |
Percent Identity: | 91.73 % |
Parental protein coverage: | 91.72 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | QFTGHGGLRGYLRIFFRANDVRLGKLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWDVDGSMV |
QF.GHGGLRGYLRIFFRANDVRLGKLVG.DKYGNKYYEDNKQFF..HRW.I.TTEMNGKNTF.DV..SMV | |
Retrocopy | QFAGHGGLRGYLRIFFRANDVRLGKLVGKDKYGNKYYEDNKQFFDHHRWAICTTEMNGKNTF*DVMESMV |
Parental | PPEWHRWLHCMTDEPPTVKPPVPRKFIWTNHKFNVSGTPEQYVPYSTTRKKIHEWVPPSTPYK |
PPEWHRWLHCMTDEPPTVKPPVP.KFIWTNHKFNVSGTPEQYVPYSTTRKKIHE.VPPSTPYK | |
Retrocopy | PPEWHRWLHCMTDEPPTVKPPVPHKFIWTNHKFNVSGTPEQYVPYSTTRKKIHE*VPPSTPYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |