RetrogeneDB ID: | retro_ggor_1971 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 3:136349730..136350087(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSGGOG00000006432 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.87 % |
Parental protein coverage: | 95.2 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
MA.AKKGGEKKKGRSAINEVVTR.YTINIH..I.GVGF.K.APRALKEIRK.AMKEMGTPDV.IDTRLNK | |
Retrocopy | MASAKKGGEKKKGRSAINEVVTRAYTINIHNHIYGVGFQKCAPRALKEIRKCAMKEMGTPDVHIDTRLNK |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQT |
AVWAKG.RNVPY.I.V.LSRKRNEDEDSPN..YTLVTY.PVT.FKNL.T | |
Retrocopy | AVWAKGTRNVPY*ICVLLSRKRNEDEDSPNNFYTLVTYIPVTNFKNL*T |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .00 RPM | 115 .33 RPM |
SRP007412_cerebellum | 0 .00 RPM | 89 .63 RPM |
SRP007412_heart | 0 .00 RPM | 55 .72 RPM |
SRP007412_kidney | 0 .00 RPM | 292 .60 RPM |
SRP007412_liver | 0 .00 RPM | 317 .14 RPM |
SRP007412_testis | 0 .00 RPM | 156 .44 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_2839 |