RetrogeneDB ID: | retro_meug_767 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold18195:17552..17997(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ORMDL2 | ||
Ensembl ID: | ENSMEUG00000014896 | ||
Aliases: | None | ||
Description: | ORM1-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:16037] |
Percent Identity: | 65.36 % |
Parental protein coverage: | 99.35 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPVVWTLTNVIHNLAMYVFLHTVKGT |
MNVGVAHSEVNP.T....S.G..L.Y...VGLLH.VLL.IPFFS.PV.WTLTN.IHNL.M.VFLH.VKG. | |
Retrocopy | MNVGVAHSEVNPYT----SYGMCLMYALRVGLLHIVLLNIPFFSVPVAWTLTNNIHNLRMHVFLHAVKGP |
Parental | PFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSIFPIVLYLLASFYTKYD-AAHFVINTASLLSVLLPKL |
PFETPDQ.KARLLTH.EQ..Y..QF..S.KF...FPI.L...ASFY.KYD....F..NT.S.L.VL.PK. | |
Retrocopy | PFETPDQAKARLLTHGEQLNYRMQFSFSWKFFKVFPIILHFPASFYNKYD>LIYFILNTTSVLGVLIPKM |
Parental | PQFHGVRLFGINK |
PQ.H.V..FGINK | |
Retrocopy | PQWHNVLIFGINK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000003047 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000000071 | 8 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000009601 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000015224 | 1 retrocopy | |
Felis catus | ENSFCAG00000013964 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000000957 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000014896 | 1 retrocopy |
retro_meug_767 ,
|
Microcebus murinus | ENSMICG00000010920 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000003575 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000006292 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000000911 | 2 retrocopies | |
Mus musculus | ENSMUSG00000025353 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000001695 | 2 retrocopies |