RetrogeneDB ID: | retro_meug_807 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold19283:4313..4832(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000015381 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.21 % |
Parental protein coverage: | 65.07 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | IGIIGGTGLDDPEILEGRTEKYVDTPYGKPSDALILGKIKNVDCVLLARHGRQHTIMPSNINFQANIWAL |
IGII.GTGLDDPEILEG.TEKYVD..YGK.SD.LI.GK.KNVD..L.ARHGRQ.TIMPSNINFQAN...L | |
Retrocopy | IGIIRGTGLDDPEILEGKTEKYVDITYGKSSDTLIWGKVKNVD--LIARHGRQYTIMPSNINFQANM-GL |
Parental | K-EEGCTHIIVTTACGSLREEIQPGDIVIIDQFIDRTTKRHQTFYDGSHACSSGVCHIPMAEPFCSK-TR |
K.EEGCTHIIVTTACGSL.EEIQPGDIVIIDQF.DRTTKR...FYDGSHACS.GV........F.SK.TR | |
Retrocopy | K>EEGCTHIIVTTACGSLSEEIQPGDIVIIDQFVDRTTKRPRAFYDGSHACSAGVTFQ*LSH-FASK<TR |
Parental | EVLIETAKKLGLKCPSKGTMVTVEGPRFSSRAESLMFRV |
EVLIETAKKLG.KC.SKGTMVT.EGPRFS...ESLMF.V | |
Retrocopy | EVLIETAKKLGFKCHSKGTMVTMEGPRFSFQGESLMFSV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000025929 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000002224 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000008021 | 2 retrocopies | |
Cavia porcellus | ENSCPOG00000000825 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000008670 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000013214 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000015381 | 2 retrocopies |
retro_meug_807 , retro_meug_917,
|
Microcebus murinus | ENSMICG00000015072 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000001137 | 1 retrocopy | |
Ornithorhynchus anatinus | ENSOANG00000013963 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000012289 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000007889 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000001259 | 1 retrocopy |