Parental gene: | MTAP, ENSOCUG00000012289 |
| Aliases: | None |
| Description: | methylthioadenosine phosphorylase [Source:HGNC Symbol;Acc:7413] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:31902795..31959367(-) |
>ENSOCUG00000012289
ATGGCCTCAGGTGCCGCCACCACCGCCGCCGTGAAGATTGGAATAATTGGTGGAACAGGCCTGGATGATCCAGAAATTTT
AGAAGGAAGAACTGAAAAGTATGTGGATACTCCATTTGGCAAGCCATCCGATGCCTTAATTTTGGGGAAAATAAAAAATG
TTGATTGCGTCCTCCTTGCCAGGCATGGGAGGCAGCACACCATCATGCCTTCCAAAGTCAACTACCAGGCAAACATCTGG
GCTTTGAAGGAGGAGGGTTGTACACATGTCATAGTGACCACAGCTTGTGGCTCCTTGAGGGAGGAGATTCAGCCCGGCGA
TATCGTCATTATCGATCAGTTCATCGACAGGACCATGACAAGGCCTCAGACCTTCTATGATGGAAGTCATTCCTGTGCCA
GAGGAGTATGCCATATTCCAATGGCTGAGCCATTTTGCCCCAAAACAAGAGAGGTCCTCATAGAGACTGCTAAGAAGCTA
GGACTCCGGTGCCACTCAAAGGGGACAATGGTCACAATTGAAGGACCGCGATTTAGCTCCCGGGCAGAAAGCTTCATGTT
CCGCACCTGGGGAGCGGATGTTATCAATATGACCACTGTTCCAGAGGTGGTTCTTGCCAAAGAGGCTGGAATTTGCTATG
CAAGTATTGCCATGGCAACAGATTATGATTGCTGGAAGGAGCACGAGGAAGCAGTTTCAGTGGACCGAGTCTTAAAGACC
CTGAAAGAAAATGCCAATAAAGCCAAAAGTTTGCTCCTCACCACCATACCTCAGATAGGGTCCACAGAATGGTCCGAAAC
CCTCCATAACCTGAAGAATATGGCCCAGTTTTCTGTTTTATTACCAAGACAT
ATGGCCTCAGGTGCCGCCACCACCGCCGCCGTGAAGATTGGAATAATTGGTGGAACAGGCCTGGATGATCCAGAAATTTT
AGAAGGAAGAACTGAAAAGTATGTGGATACTCCATTTGGCAAGCCATCCGATGCCTTAATTTTGGGGAAAATAAAAAATG
TTGATTGCGTCCTCCTTGCCAGGCATGGGAGGCAGCACACCATCATGCCTTCCAAAGTCAACTACCAGGCAAACATCTGG
GCTTTGAAGGAGGAGGGTTGTACACATGTCATAGTGACCACAGCTTGTGGCTCCTTGAGGGAGGAGATTCAGCCCGGCGA
TATCGTCATTATCGATCAGTTCATCGACAGGACCATGACAAGGCCTCAGACCTTCTATGATGGAAGTCATTCCTGTGCCA
GAGGAGTATGCCATATTCCAATGGCTGAGCCATTTTGCCCCAAAACAAGAGAGGTCCTCATAGAGACTGCTAAGAAGCTA
GGACTCCGGTGCCACTCAAAGGGGACAATGGTCACAATTGAAGGACCGCGATTTAGCTCCCGGGCAGAAAGCTTCATGTT
CCGCACCTGGGGAGCGGATGTTATCAATATGACCACTGTTCCAGAGGTGGTTCTTGCCAAAGAGGCTGGAATTTGCTATG
CAAGTATTGCCATGGCAACAGATTATGATTGCTGGAAGGAGCACGAGGAAGCAGTTTCAGTGGACCGAGTCTTAAAGACC
CTGAAAGAAAATGCCAATAAAGCCAAAAGTTTGCTCCTCACCACCATACCTCAGATAGGGTCCACAGAATGGTCCGAAAC
CCTCCATAACCTGAAGAATATGGCCCAGTTTTCTGTTTTATTACCAAGACAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 14 .26 RPM |
| SRP017611_kidney | 33 .04 RPM |
| SRP017611_brain | 9 .88 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000002224 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000008021 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000000825 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008670 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000013214 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000015381 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000015072 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000001137 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000013963 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007889 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000001259 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_341 | 84.91 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1355 | 91.58 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000012289 retrocopies