RetrogeneDB ID: | retro_mluc_1067 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429791:2366143..2366536(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MOB1B | ||
Ensembl ID: | ENSMLUG00000005838 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 52.9 % |
Parental protein coverage: | 62.79 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 3 |
Parental | ESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDET-LFPSKIGVPFPKNFMSVAKT |
..CPVM.A..KYEY..AD.TNI.KPIK...P....YL...V.D.L.DET.LF.SK.GV.FP.......K. | |
Retrocopy | KKCPVMFACAKYEYYLADDTNI*KPIKYLSP*HSNYLISLVLDILEDET<LFYSKTGVLFPRKLYVCGKD |
Parental | -ILKRLFRVYAHIYHQHFDPVIQLQEEAHLNTSF-KHFIFFVQEFNLVDRRELAPLQELIEKLTSKDR |
...K.LFR...HI....FD.V....EE.HLN..F..HF.F...E.NL.DR.EL.PLQELIEKL.SK.R | |
Retrocopy | <LPKCLFRANIHI**LYFDFV--M*EEIHLNIFF<QHF-FTPPECNLTDRHELTPLQELIEKLRSKHR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000012418 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000014210 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000006469 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000005838 | 1 retrocopy |
retro_mluc_1067 ,
|
Myotis lucifugus | ENSMLUG00000006539 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000009133 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000008941 | 2 retrocopies | |
Vicugna pacos | ENSVPAG00000011892 | 1 retrocopy |