RetrogeneDB ID: | retro_mmur_1622 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_9593:11752..12379(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MOB1B | ||
Ensembl ID: | ENSMICG00000006469 | ||
Aliases: | None | ||
Description: | MOB kinase activator 1B [Source:HGNC Symbol;Acc:29801] |
Percent Identity: | 92.86 % |
Parental protein coverage: | 99.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRMAVMLPEGEDLNEWVAVNTVDFFNQINMLYGTIT |
SRSSKTFKPKKNIPEGSHQYELLKH.EATLGSGNLR.AVMLP.GEDLNEW.AVNTVDFFN.INMLYGTIT | |
Retrocopy | SRSSKTFKPKKNIPEGSHQYELLKHVEATLGSGNLRQAVMLP-GEDLNEWIAVNTVDFFNHINMLYGTIT |
Parental | DFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMS |
.FCT..SCPVMSAGP.YEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFP.NFMS | |
Retrocopy | EFCTKASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPRNFMS |
Parental | VAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLTSKDR |
VAKTILK.LFRVYAHIYHQHFD.V.QLQEEAHLN.SFKHFIFFVQEFNLIDRRELAPLQELIEKL.SKDR | |
Retrocopy | VAKTILKCLFRVYAHIYHQHFDSVMQLQEEAHLNISFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000012418 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000014210 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000006469 | 2 retrocopies |
retro_mmur_1622 , retro_mmur_653,
|
Myotis lucifugus | ENSMLUG00000005838 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000009133 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000008941 | 2 retrocopies | |
Vicugna pacos | ENSVPAG00000011892 | 1 retrocopy |