RetrogeneDB ID: | retro_mluc_1095 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429794:1383680..1383957(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000024611 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PPP1R14C | ||
Ensembl ID: | ENSMLUG00000023245 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.11 % |
Parental protein coverage: | 54.97 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | QGKVTVKYDRKELRKRLVLEEWIVEQLGRLYGCEEEEMPDVEIDIDDLLDADSEEERALKLREALVDCH- |
Q.KVTVKYDRKEL.KRL.LEEWI..Q..RLY.C..EE.P..E..ID.LLD..S...RA....E.LVDC.. | |
Retrocopy | QEKVTVKYDRKELQKRLNLEEWILKQFTRLYDCQKEEIP--ELEIDKLLDMESDDTRAARVKELLVDCY> |
Parental | KPTEEFIKELLSRIRGMRKLSPPQK |
KPTE.FI..LL..I.GM.KLS.PQK | |
Retrocopy | KPTEAFISGLLDKIWGMQKLSTPQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000026586 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000017261 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000022952 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000023245 | 2 retrocopies |
retro_mluc_1095 , retro_mluc_499,
|
Mus musculus | ENSMUSG00000040653 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000017102 | 4 retrocopies | |
Tarsius syrichta | ENSTSYG00000002873 | 1 retrocopy |