RetrogeneDB ID: | retro_mluc_1336 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429823:5990369..5990536(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COA5 | ||
Ensembl ID: | ENSMLUG00000013167 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.89 % |
Parental protein coverage: | 75.68 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | EDLGACLLQSHCVLQEGK-SPRQCLKEGNCRALKNSFFECKRSMLDARSRFRGRKGY |
.DLG.C.LQ...V.QEGK.S...C.K.GN.......FF.C.RS.LDARSRFRGRK.Y | |
Retrocopy | QDLGMCRLQEDRVFQEGK<SRLPCEKKGNQKL*NVLFF*CRRSVLDARSRFRGRKEY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000007139 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000009263 | 1 retrocopy | |
Equus caballus | ENSECAG00000004183 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000013626 | 1 retrocopy | |
Felis catus | ENSFCAG00000004424 | 1 retrocopy | |
Homo sapiens | ENSG00000183513 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000006019 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000013167 | 2 retrocopies |
retro_mluc_1336 , retro_mluc_1760,
|
Monodelphis domestica | ENSMODG00000001197 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000001998 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000002972 | 3 retrocopies | |
Pongo abelii | ENSPPYG00000012085 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000012267 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000001578 | 1 retrocopy | |
Sorex araneus | ENSSARG00000006275 | 1 retrocopy |