RetrogeneDB ID: | retro_mluc_1426 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429836:3469557..3470007(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000008267 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ASF1B | ||
Ensembl ID: | ENSMLUG00000000537 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.97 % |
Parental protein coverage: | 75.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EEFDQILDSVLVGPIPAGRHMFVFQADAPNPSLIPESDAIGVTVVLITCTYHGQEFIRVGYYVNNEYPDP |
EEFDQILDS.LV.....G...F.FQADAPNPSLIPE.DAIGVTVVL.TCT..GQEF..VG.YVN.EY.DP | |
Retrocopy | EEFDQILDSMLVVLSQPG-DAFLFQADAPNPSLIPETDAIGVTVVLVTCTSRGQEFTCVGHYVN-EYSDP |
Parental | ELRENPPPKPDFSQLQRNILASNPRVTRFHINWDSNTDRLEAIENQDPALSCSLPINCTPVKGLGLPGCI |
EL.ENPPPKPDFSQL.RN.LA.NP..TRFHINWD.NTDRL.A.ENQDP.LS.SLPINC..VKGLGLPGCI | |
Retrocopy | ELGENPPPKPDFSQLPRNVLAVNPWMTRFHINWDNNTDRLQAVENQDPTLSSSLPINCILVKGLGLPGCI |
Parental | PGLLPENSMDCI |
.GLLPE.SM.CI | |
Retrocopy | HGLLPESSMGCI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000004085 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000016482 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000013713 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000000537 | 4 retrocopies | |
Myotis lucifugus | ENSMLUG00000013053 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000012099 | 4 retrocopies | |
Sorex araneus | ENSSARG00000000534 | 1 retrocopy |