RetrogeneDB ID: | retro_mluc_1565 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429862:1821663..1821954(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000015593 | ||
Aliases: | None | ||
Description: | DNA-directed RNA polymerase subunit [Source:UniProtKB/TrEMBL;Acc:G1PSP3] |
Percent Identity: | 84.54 % |
Parental protein coverage: | 89.81 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | LIVEEGQRCHRFACNTCPYVHNITRKVTNRKYPKLKEVDDVLGGAAAWENVDSTAEPCPKCEHPRAYFMQ |
L..EEG.RCH.FACNTCP.VH..T.KVTNRKYPKLKEVDD.LGGAAAWENVDSTAEPCPKCEHPR.YFMQ | |
Retrocopy | LAKEEGERCHHFACNTCPSVHTTTSKVTNRKYPKLKEVDDMLGGAAAWENVDSTAEPCPKCEHPRVYFMQ |
Parental | LQTRSADEPMTTFYKCCNAQCGHRWRD |
LQ.RSAD.PMTT.YK.CNAQCGH.WRD | |
Retrocopy | LQNRSAD*PMTTVYK*CNAQCGHCWRD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000019715 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000011568 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000009989 | 2 retrocopies | |
Felis catus | ENSFCAG00000009110 | 2 retrocopies | |
Homo sapiens | ENSG00000161980 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000015593 | 3 retrocopies |
retro_mluc_1565 , retro_mluc_1943, retro_mluc_341,
|
Oryctolagus cuniculus | ENSOCUG00000013608 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000002526 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000007525 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000000530 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000007970 | 1 retrocopy |