Parental gene:

POLR3K, ENSFCAG00000009110

Aliases:None
Description:polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa [Source:HGNC Symbol;Acc:14121]
Organism:Cat (Felis catus)
Coordinates:E3:42989412..42993225(+)


>ENSFCAG00000009110
ATGCTGCTCTTCTGCCCTGGTTGCGGGAATGGGCTAATCGTGGAAGAGGGACAGCGCTGCCACCGCTTCGCCTGCAACAC
CTGCCCCTACGTGCACAACATCACCCGCAAGGTAACAAATCGGAAATACCCAAAGCTGAAAGAAGTGGATGACGTGCTTG
GTGGAGCAGCGGCCTGGGAGAATGTTGACTCTACTGCAGAGTCCTGCCCGAAATGCGAGCATCCTCGTGCCTATTTCATG
CAGCTTCAGACCCGCTCTGCAGATGAGCCAATGACCACTTTCTACAAATGCTGCAATGCTCAGTGTGGACACCGCTGGAG
GGAC

Library Parental gene expression (RPM)
SRP017611_liver 3 .54 RPM
SRP017611_kidney 6 .08 RPM
SRP017611_brain 5 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000019715 ortholog_one2one 1 retrogene
retro_cfam_1881,
Callithrix jacchus ENSCJAG00000011568 ortholog_one2one 1 retrogene
retro_cjac_2660,
Echinops telfairi ENSETEG00000009989 ortholog_one2one 2 retrogenes
retro_etel_1166, retro_etel_1543,
Homo sapiens ENSG00000161980 ortholog_one2one 1 retrogene
retro_hsap_1861,
Myotis lucifugus ENSMLUG00000015593 ortholog_one2many 3 retrogenes
retro_mluc_1565, retro_mluc_1943, retro_mluc_341,
Oryctolagus cuniculus ENSOCUG00000013608 ortholog_one2many 1 retrogene
retro_ocun_145,
Otolemur garnettii ENSOGAG00000002526 ortholog_one2many 2 retrogenes
retro_ogar_1101, retro_ogar_254,
Pan troglodytes ENSPTRG00000007525 ortholog_one2one 1 retrogene
retro_ptro_1241,
Pteropus vampyrus ENSPVAG00000000530 ortholog_one2one 1 retrogene
retro_pvam_928,
Sus scrofa ENSSSCG00000007970 ortholog_one2one 1 retrogene
retro_sscr_1141,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_409 66.99 93.52
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2. retro_fcat_1978 75.28 81.48
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Download FASTA sequences of all ENSFCAG00000009110 retrocopies