>retro_mluc_2037
CTGGAGTTCGCCATCCAGCCAGACACACCAGGAAAGCTGCTTTTTGATCAGGTGGTTAAGACAATCAGCCTTTGGGAAGT
GTGGTGCTTCGGCCTCCAGTGTGTAGATAATAAAGGATTTCCCACCTGGTTGAAACTTGATAAAAAGGTGTTGGCCCAGG
AGGTCAGGAAGGAGAATCCCCTGCAGTTCAAGTTCAGGGCCAAGTTCTGCCCCGAGGACGTGCCTGAGGAGCTCATCCAG
GACATTACGCAGAAGCTTTTCTTCCTCCACGTGAAGGAGGGCATTCTGAGCGATGAGATTTACTGCCCTCCTGAGACTGT
GGTGCTCCTTGGCTCCTACGCCATGCAGGCCAAGTTTGGAGACCATAACAAAGAAATTCACAAGTATGGGTACCTCAGCT
CCGAGCGGCTGATCCCCCAGAAAGTCATTGAGCAGCACAAGCTCACCAGGGACCAGTGGGAGGACCGGATCCAGGTATGG
CACATGGGGCACCGCGGGATGCTCAAAGTTAGTGCCATGCTGGAGTGCCTGAAGATTGCCCAGGACCTGGAAATGTACAG
AATCAACTATTTTGAGATTAAAAAAAATAAGAACGGAACTGACTGTGGCTTGTAGTGGATGCCCTGGGACTAAATATTTA
TGAGAAAGTTGATAATTTGACCCCAAAGATTGGCTTCCCGTGGAGTGAGATCAGGAACATCCATTTCAATGACAAGAACT
TTGTCATCAAGCCCATCGACAAGAAGGCGCCTGACTTCGTCTTCTATGCCCCCCGCCTGCACATCAACAAGCGGATCCTG
CAGCTCCACCTGGGGAACCACGAGCTATACATGTGCTGCAAAAAGCCCGACAACATCGAGGTGCAGCAGATGAAGGCCCA
GGCCCGCAAGGAGAAGCACCAGAAGCAGCTGGAGCAGCAGCAGCTGGAAACTAAGAAGAAGAGGCGAGAGACTGTGGAGA
GAAAAGGAGCAGATGATGCAGGAGAAGGAGGAGCTGATGCTGAGGCTCCAGGACTATGAGCAGAAGACCAAGAAGGCCAA
GAAAGAGCTCTCGGACCAGATCCAGAGGGCCCTGCAGCTGGAGGAGGAGCGG
ORF - retro_mluc_2037 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
84.55 % |
Parental protein coverage: |
76.57 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
2 |
Retrocopy - Parental Gene Alignment:
Parental | LEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLQYVDNKGFPTWLKLDKKVSAQEVRKENPLQFKFRAKFY |
| LEFAIQP.T.GK.LFDQVVKTI.L.EVW.FGLQ.VDNKGFPTWLKLDKKV.AQEVRKENPLQFKFRAKF. |
Retrocopy | LEFAIQPDTPGKLLFDQVVKTISLWEVWCFGLQCVDNKGFPTWLKLDKKVLAQEVRKENPLQFKFRAKFC |
|
Parental | PEDVPEELIQDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAKFGDYNKEMHKSGYLSSERLIPQ |
| PEDVPEELIQDITQKLFFL.VKEGILSDEIYCPPET.VLLGSYA.QAKFGD.NKE.HK.GYLSSERLIPQ |
Retrocopy | PEDVPEELIQDITQKLFFLHVKEGILSDEIYCPPETVVLLGSYAMQAKFGDHNKEIHKYGYLSSERLIPQ |
|
Parental | RVMDQHKLTRDQWEDRIQVWHAENRGCSTNRDSAMLEYLKIAQDLEMYGINYFEI-KNKKGTD-LWLGVD |
| .V..QHKLTRDQWEDRIQVWH...RG......SAMLE.LKIAQDLEMY.INYFEI...K.GTD.LWL.VD |
Retrocopy | KVIEQHKLTRDQWEDRIQVWHMGHRGML--KVSAMLECLKIAQDLEMYRINYFEIXXXKNGTD<LWLVVD |
|
Parental | ALGLNIYEKEDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILQLCMGNHELY |
| ALGLNIYEK.D.LTPKIGFPWSEIRNI.FNDK.FVIKPIDKKAPDFVFYAPRL.INKRILQL..GNHELY |
Retrocopy | ALGLNIYEKVDNLTPKIGFPWSEIRNIHFNDKNFVIKPIDKKAPDFVFYAPRLHINKRILQLHLGNHELY |
|
Parental | MRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVER-EKEQMMREKEELMLRLQDYEQKTKK |
| M...KPD.IEVQQMKAQAR.EKHQKQLE.QQLET.KKRRETVER.....M..EKEELMLRLQDYEQKTKK |
Retrocopy | MCCKKPDNIEVQQMKAQARKEKHQKQLEQQQLETKKKRRETVER>KEQMM-QEKEELMLRLQDYEQKTKK |
|
Parental | AEKELSDQIQRALQLEEER |
| A.KELSDQIQRALQLEEER |
Retrocopy | AKKELSDQIQRALQLEEER |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Myotis lucifugus was not studied using RNA-Seq expression data.
Myotis lucifugus was not studied using ChIP-Seq data.
Myotis lucifugus was not studied using EST data.
Myotis lucifugus was not studied using FANTOM5 data.
retro_mluc_2037 was not experimentally validated.
Retrocopy orthology:
Myotis lucifugus does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
3 parental genes, and
5 retrocopies.