RetrogeneDB ID: | retro_mluc_2176 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430077:1087969..1088454(-) | ||
Located in intron of: | ENSMLUG00000010862 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ZCCHC17 | ||
Ensembl ID: | ENSMLUG00000000594 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.34 % |
Parental protein coverage: | 67.5 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIEQEE |
..GLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQ.TGKDLDPNN.IIEQEE | |
Retrocopy | RRGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQRTGKDLDPNNAIIEQEE |
Parental | RRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEDEEKVEAKAADFDKPDPT |
R.RRSF.DYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEDEEKVEAKAADFDKPDPT | |
Retrocopy | RWRRSFHDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPDEDEEKVEAKAADFDKPDPT |
Parental | KNSRKR-KKEKKKKKHRDKKSSD |
KNSRKR.K....K....D...S. | |
Retrocopy | KNSRKR<KHRDRKSSDSDSSDSE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000017710 | 1 retrocopy | |
Bos taurus | ENSBTAG00000016818 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000011131 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000000509 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000004128 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000007421 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000015364 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000000594 | 1 retrocopy |
retro_mluc_2176 ,
|
Monodelphis domestica | ENSMODG00000017082 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015442 | 1 retrocopy | |
Mus musculus | ENSMUSG00000028772 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000013749 | 1 retrocopy | |
Sorex araneus | ENSSARG00000007944 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000003825 | 1 retrocopy |