RetrogeneDB ID: | retro_mputfur_680 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896934.1:9411729..9412290(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ZCCHC17 | ||
Ensembl ID: | ENSMPUG00000015442 | ||
Aliases: | None | ||
Description: | zinc finger, CCHC domain containing 17 [Source:HGNC Symbol;Acc:30246] |
Percent Identity: | 64.02 % |
Parental protein coverage: | 78.33 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MNSGRPETMENLPALYTIFQGELLLITNFGNRLKMAPCFDPGLVHRTHMSSCRVDKPSEIVDVGDK-VWV |
.NSGRP.T...LPA.YT.FQ.E....T......K...C...GLV.RTHMSSC....PSEI..V..K.V.. | |
Retrocopy | INSGRPKTVKDLPAVYTVFQSEVIIMTDYETFIKIPGCWKQGLVLRTHMSSCCMNEPSEIAEVREKNVRG |
Parental | KLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCK |
KLIG...KNDRI.V..SMKVVNQ.T.K.LD.NNVI.E.EER.R.SF.DYTGQ.ITL..VL.TT.K.CGCK | |
Retrocopy | KLIG*QVKNDRINVYCSMKVVNQSTEKGLDTNNVITE*EERQRQSFHDYTGQ-ITLKTVLHTTYKQCGCK |
Parental | GHFAKDCFMQPGGTKYSLIPDEEEEKEEAKSADFEKPDPTRNSSRKRKK |
..FAKD.FMQP.GTKYSL.PDEEEEKEE.KSA..EKPDP.R..SRKRKK | |
Retrocopy | NYFAKDRFMQP*GTKYSLMPDEEEEKEEEKSAESEKPDPMRD-SRKRKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000017710 | 1 retrocopy | |
Bos taurus | ENSBTAG00000016818 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000011131 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000000509 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000004128 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000007421 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000015364 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000000594 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000017082 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015442 | 1 retrocopy |
retro_mputfur_680 ,
|
Mus musculus | ENSMUSG00000028772 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000013749 | 1 retrocopy | |
Sorex araneus | ENSSARG00000007944 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000003825 | 1 retrocopy |