RetrogeneDB ID: | retro_mluc_604 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:20215085..20215667(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF2S2 | ||
Ensembl ID: | ENSMLUG00000005335 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.2 % |
Parental protein coverage: | 58.26 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | KTKKIFDIDEAEEGVKDLKIESDVQEPAEPEDDLDIMLGNKKKKKKNVKFPDEDEILEKDEALEDEDSKK |
K.K.I.DIDEAEEG.K.LK.ESDVQEPAE.EDDLDI...NKKKK.KNVKFPDE.EILEKD.ALEDEDSKK | |
Retrocopy | KEKRILDIDEAEEGIKALKTESDVQEPAEAEDDLDIAPDNKKKK*KNVKFPDENEILEKDKALEDEDSKK |
Parental | DDGISFSNQTGPAWAGSERDYTYEELLNRVFNIMREKNPDMVAGEKRKFVMKPPQVVRVGTKKTSFVNFT |
D.G.SFSN..G...A.SER.Y.Y.ELLN.VF.IMRE.NPD.VAGEK.KFVM.PP.VV.V.T..TSFVNFT | |
Retrocopy | DYGLSFSNHKGLT*ASSERNYMYKELLNQVFKIMRENNPDKVAGEKSKFVMIPPKVV*VETMSTSFVNFT |
Parental | DICKLLHRQPKHLLAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKE |
.ICKLLH.Q.KHL..FL.AELGTSGSI.GNNQLVIK.RF..KQIENV....... | |
Retrocopy | HICKLLHHQFKHLIVFLFAELGTSGSIYGNNQLVIKRRF*KKQIENVFEKMYQQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000007498 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000006521 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000018334 | 2 retrocopies | |
Cavia porcellus | ENSCPOG00000015439 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000001922 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000005335 | 1 retrocopy |
retro_mluc_604 ,
|
Monodelphis domestica | ENSMODG00000002805 | 5 retrocopies | |
Mus musculus | ENSMUSG00000074656 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000001417 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000010933 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000017447 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000009970 | 2 retrocopies |