RetrogeneDB ID: | retro_mluc_624 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:5492204..5492951(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARMC10 | ||
Ensembl ID: | ENSMLUG00000006088 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.36 % |
Parental protein coverage: | 93.61 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | SYDDVLNAEQLQKLLYLLELTEDPAIIERALVTLGNNAAFSANQVIIRELGGIPIVGSKIKDPNHSIKEK |
SYDDVLNAEQLQKLLYLLELTEDP.IIERALVTLGNNAAFSANQ.IIRELGGIP.VGSKI.DPNHSIKEK | |
Retrocopy | SYDDVLNAEQLQKLLYLLELTEDPTIIERALVTLGNNAAFSANQAIIRELGGIPLVGSKINDPNHSIKEK |
Parental | ALNALSNLSVNVENQIKIKVYVNQVCEDVLSGPLNSPVQLAGLRLLTNMTVTNDHQHMFTNYITDLFQVL |
ALNAL.NLSVNVENQIKIKVYVN.VCEDV.SG.LNSPVQL.GLRLL..MTVTNDHQHMFTNYITDLFQVL | |
Retrocopy | ALNALNNLSVNVENQIKIKVYVN*VCEDVFSGSLNSPVQLMGLRLLIHMTVTNDHQHMFTNYITDLFQVL |
Parental | LAGNGTTKVQVLKLLLNLSENPAMTEGLLGAQVDSSFLSLYDGHVAKEILLRALTLFQNINNCLKKEGHL |
L.GNGTTKVQVLKLLLNLSE.PAMTEGL.GAQVDSSFLSLYDGH.AKE.LL.ALTL.QNINNCLK.EGHL | |
Retrocopy | LSGNGTTKVQVLKLLLNLSEDPAMTEGLFGAQVDSSFLSLYDGHMAKELLL*ALTLIQNINNCLKMEGHL |
Parental | TVQPTFTQGSLFFLLYGEECAQKMRALVNHHDADVKEKL |
..Q.TFTQGSLFFLLYGEECAQKMRALVNHHDADVK.K. | |
Retrocopy | AIQSTFTQGSLFFLLYGEECAQKMRALVNHHDADVKKKV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000004247 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000002095 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000021208 | 2 retrocopies | |
Cavia porcellus | ENSCPOG00000019936 | 1 retrocopy | |
Homo sapiens | ENSG00000170632 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000010160 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000006088 | 3 retrocopies |
retro_mluc_1587, retro_mluc_1825, retro_mluc_624 ,
|
Mus musculus | ENSMUSG00000038525 | 3 retrocopies | |
Vicugna pacos | ENSVPAG00000008914 | 1 retrocopy |