RetrogeneDB ID: | retro_mmur_1021 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_164170:7..681(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SLC25A6 | ||
Ensembl ID: | ENSMICG00000006136 | ||
Aliases: | None | ||
Description: | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:HGNC Symbol;Acc:10992] |
Percent Identity: | 69.4 % |
Parental protein coverage: | 86.59 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 6 |
Parental | VQHASKQIAADKQYKGIVDCIVRIPKEQGMLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHT |
VQHAS.Q..ADK.Y.GIV.C.VRIPKEQG.LSF.RG.LA.V...FPTQALN.AFK..YKQI.LG..D.H. | |
Retrocopy | VQHASTQVTADKRYTGIVACLVRIPKEQGVLSFPRGSLAHVTC*FPTQALNLAFKVVYKQICLGCMDEHA |
Parental | QFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFKG-LGDCLVKITKSDGIRGLYQG |
QFWRYFAGNLA.GGAAGATSLC..YPLDFA.T.LA.D..KSG.EREFKG.LG..LV.ITKS.G..GL.QG | |
Retrocopy | QFWRYFAGNLACGGAAGATSLCVMYPLDFAETCLATDMEKSGIEREFKG<LGGGLVTITKSHGVPGLDQG |
Parental | -FNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIA-QT-VTAVAGVVSYPFDTVRRRMMM-QS |
.F...VQG.I..RAA.FG.Y.TAKG.L.DP.NTHIVVSW..A.QT...AVAGVVSYPF..VR..M.M..S | |
Retrocopy | >FSILVQGFIVCRAAHFGTYSTAKGTLCDPENTHIVVSWTVA<QT<LMAVAGVVSYPFNAVRLWMVM<VS |
Parental | GRKGADIMYK-GTVDCWRKIFR |
GRKGADI.Y..GT...WRKIFR | |
Retrocopy | GRKGADIRYR<GTLHGWRKIFR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000005609 | 1 retrocopy | |
Homo sapiens | ENSG00000169100 | 5 retrocopies | |
Gorilla gorilla | ENSGGOG00000023004 | 2 retrocopies | |
Loxodonta africana | ENSLAFG00000001584 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000002757 | 3 retrocopies | |
Microcebus murinus | ENSMICG00000006136 | 2 retrocopies |
retro_mmur_1021 , retro_mmur_922,
|
Microcebus murinus | ENSMICG00000010865 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000006899 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000000389 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000000963 | 2 retrocopies |