RetrogeneDB ID: | retro_mmur_850 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_11018:6837..7567(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AGK | ||
Ensembl ID: | ENSMICG00000002561 | ||
Aliases: | None | ||
Description: | acylglycerol kinase [Source:HGNC Symbol;Acc:21869] |
Percent Identity: | 91.6 % |
Parental protein coverage: | 58.91 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | HITDAALAIVKGETVPLDV-LQIKGEKEQPVFAMTGLRW-GSFRDAGVRVSNYWYLGPLKTKAAHFFSTL |
HITDAALAI.KGE.VPLDV.LQIKGEKEQPVFAMTGLRW.GSFRDAGV.VSNYW..GPLKTKAAHFFSTL | |
Retrocopy | HITDAALAIGKGEAVPLDV<LQIKGEKEQPVFAMTGLRW<GSFRDAGVKVSNYWHPGPLKTKAAHFFSTL |
Parental | KEWPQTHQASISYTGPTERSPSEPEETSPRPSLYRRILRRLASFWAQPQDAPSQEVSPEVWKEVQLSTIE |
KEWPQ.HQASISYTGPTERSPSEPEETSPRPSLYRRIL.RL....A.PQDAPSQEVSPEVWKEVQLSTIE | |
Retrocopy | KEWPQIHQASISYTGPTERSPSEPEETSPRPSLYRRIL*RL----AKPQDAPSQEVSPEVWKEVQLSTIE |
Parental | LSITTRNSQLDLTSKEDFMNICIEPDAVSKGDFITIGSKKVRDPKLHAEGTTCLQASQCALLLPEGTGGS |
LSI.TRN.QLDLTSKEDFMN.CIEPDAVSKGDFITIGSKKVRDPKLHA.GTTCLQASQCALLLPEGTGGS | |
Retrocopy | LSIATRNGQLDLTSKEDFMNTCIEPDAVSKGDFITIGSKKVRDPKLHAQGTTCLQASQCALLLPEGTGGS |
Parental | FSIDSEEYEAMPVEVKLLPRKLQFFCDPRKREQGLQSTAQ |
FSIDSEEYEAMPV.V.LLPRKLQFFCDPRKRE.GLQSTAQ | |
Retrocopy | FSIDSEEYEAMPV*VELLPRKLQFFCDPRKRERGLQSTAQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000013589 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000008821 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000002479 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000002561 | 1 retrocopy |
retro_mmur_850 ,
|
Macaca mulatta | ENSMMUG00000021017 | 1 retrocopy | |
Mus musculus | ENSMUSG00000029916 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000002291 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000018064 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000019775 | 2 retrocopies |