RetrogeneDB ID: | retro_nleu_2797 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397432.1:296504..296805(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PGRMC1 | ||
Ensembl ID: | ENSNLEG00000014842 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.99 % |
Parental protein coverage: | 51.79 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | GKVFDVTKGRKFYGP-EGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFK |
GKVF..T...KF.GP..GP...FA.RD.SRG.ATFCLDK.AL.D..DDLSDL..AQ.ET.SDW.SQFTFK | |
Retrocopy | GKVFSMTRDCKFQGP<KGPHRIFAERDTSRGPATFCLDKGALQDKHDDLSDLPPAQEETQSDWASQFTFK |
Parental | YHHVGKLLKE-GEEPTVYSDEEEPKDESARKND |
Y....KLLKE.GE.PTV.SD.EEPKDE...KND | |
Retrocopy | YSQLDKLLKE<GEVPTVDSDKEEPKDENVQKND |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000018372 | 1 retrocopy | |
Homo sapiens | ENSG00000101856 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000014466 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000014842 | 1 retrocopy |
retro_nleu_2797 ,
|
Pongo abelii | ENSPPYG00000020666 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000012786 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000024047 | 1 retrocopy |